Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OR7M1P-201ENST00000608946 533 ntBASIC6.18□□□□□ -1.42
RB1P06400 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 AC068870.2-201ENST00000620635 389 ntBASIC6.18□□□□□ -1.42
RB1P06400 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RB1P06400 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RB1P06400 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 AOX3P-204ENST00000491025 2107 ntBASIC6.17□□□□□ -1.42
RB1P06400 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 AC022034.1-201ENST00000512867 2156 ntBASIC6.17□□□□□ -1.42
RB1P06400 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.17□□□□□ -1.42
RB1P06400 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 AC025470.1-201ENST00000510053 2032 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC105749.1-201ENST00000631338 2008 ntBASIC6.17□□□□□ -1.42
RB1P06400 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 AC083799.1-201ENST00000366451 910 ntBASIC6.17□□□□□ -1.42
RB1P06400 SNORA70H-201ENST00000383910 135 ntBASIC6.17□□□□□ -1.42
RB1P06400 SNORA70J-201ENST00000384182 135 ntBASIC6.17□□□□□ -1.42
RB1P06400 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.17□□□□□ -1.42
RB1P06400 RPL7L1P9-201ENST00000431298 745 ntBASIC6.17□□□□□ -1.42
RB1P06400 RPS12P17-201ENST00000438591 377 ntBASIC6.17□□□□□ -1.42
RB1P06400 AL663074.2-201ENST00000440621 479 ntBASIC6.17□□□□□ -1.42
RB1P06400 RN7SL51P-201ENST00000468230 285 ntBASIC6.17□□□□□ -1.42
RB1P06400 AL355032.1-201ENST00000472981 438 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC008953.1-201ENST00000497334 318 ntBASIC6.17□□□□□ -1.42
RB1P06400 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RB1P06400 SUMO2P4-201ENST00000504193 276 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC138409.2-202ENST00000507274 458 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC147055.3-201ENST00000510547 851 ntBASIC6.17□□□□□ -1.42
RB1P06400 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.17□□□□□ -1.42
RB1P06400 AC092593.2-201ENST00000513866 913 ntBASIC6.17□□□□□ -1.42
RB1P06400 CYP4F27P-201ENST00000514557 494 ntBASIC6.17□□□□□ -1.42
RB1P06400 CDH12P4-201ENST00000517835 295 ntBASIC6.17□□□□□ -1.42
RB1P06400 CDH12P3-201ENST00000517935 295 ntBASIC6.17□□□□□ -1.42
RB1P06400 CDH12P1-201ENST00000518435 295 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC007494.1-201ENST00000562293 760 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.17□□□□□ -1.42
RB1P06400 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 AC024940.4-201ENST00000605507 246 ntBASIC6.17□□□□□ -1.42
RB1P06400 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.17□□□□□ -1.42
RB1P06400 AP001885.1-201ENST00000621658 558 ntBASIC6.17□□□□□ -1.42
RB1P06400 AC004836.1-201ENST00000623032 634 ntBASIC6.17□□□□□ -1.42
RB1P06400 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 AL442128.2-201ENST00000620246 1824 ntBASIC6.17□□□□□ -1.42
RB1P06400 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.17□□□□□ -1.42
RB1P06400 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.17□□□□□ -1.42
RB1P06400 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RB1P06400 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RB1P06400 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.16□□□□□ -1.42
RB1P06400 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.16□□□□□ -1.42
RB1P06400 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.16□□□□□ -1.42
RB1P06400 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 RNU4-2-201ENST00000365668 141 ntBASIC6.16□□□□□ -1.42
RB1P06400 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.16□□□□□ -1.42
RB1P06400 MIR585-201ENST00000384887 94 ntBASIC6.16□□□□□ -1.42
RB1P06400 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RB1P06400 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RB1P06400 AL357752.1-201ENST00000412817 349 ntBASIC6.16□□□□□ -1.42
RB1P06400 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.16□□□□□ -1.42
RB1P06400 Z85994.2-201ENST00000434327 452 ntBASIC6.16□□□□□ -1.42
RB1P06400 CYCSP12-201ENST00000437729 300 ntBASIC6.16□□□□□ -1.42
RB1P06400 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.16□□□□□ -1.42
RB1P06400 AL450023.1-201ENST00000450868 751 ntBASIC6.16□□□□□ -1.42
RB1P06400 RPL7P45-201ENST00000455851 743 ntBASIC6.16□□□□□ -1.42
RB1P06400 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 ACA64.4-201ENST00000459070 127 ntBASIC6.16□□□□□ -1.42
RB1P06400 AL157777.1-201ENST00000468100 304 ntBASIC6.16□□□□□ -1.42
RB1P06400 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.16□□□□□ -1.42
RB1P06400 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.16□□□□□ -1.42
RB1P06400 AC090638.1-201ENST00000498296 909 ntBASIC6.16□□□□□ -1.42
RB1P06400 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RB1P06400 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.16□□□□□ -1.42
RB1P06400 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms