Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AL133351.3-201ENST00000454998 193 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RPS23P2-201ENST00000463671 415 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RPS27P20-201ENST00000492051 246 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC117500.1-201ENST00000497352 755 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC113367.2-201ENST00000505749 160 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RNA5SP434-201ENST00000516647 121 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC100784.1-201ENST00000522790 310 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC022616.2-201ENST00000523185 300 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 PMS2P3-207ENST00000529061 717 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC008055.1-201ENST00000547032 609 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AC011891.2-201ENST00000604949 397 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MIR6813-201ENST00000621638 56 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 STX3-208ENST00000641815 3236 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 AP000542.2-201ENST00000623199 6179 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 CASC19-246ENST00000641625 1606 ntBASIC4.2□□□□□ -1.74
HLA-DQA1P01909 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1P01909 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 CDY11P-201ENST00000447168 1651 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AP005432.1-201ENST00000580891 3485 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC007842.1-201ENST00000597336 2039 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 MIPEPP2-201ENST00000422560 1819 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 DHFRP2-201ENST00000414224 547 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC019205.1-201ENST00000421830 730 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 PSMD10P2-201ENST00000432890 672 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AL445928.1-201ENST00000435545 222 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC128677.1-201ENST00000436016 442 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 RPS12P17-201ENST00000438591 377 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AL645936.1-201ENST00000441979 518 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AL157385.1-201ENST00000446973 268 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 KF459542.1-201ENST00000450908 553 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 H3F3AP5-201ENST00000475267 429 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 RN7SL612P-201ENST00000497704 295 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC091912.1-201ENST00000511351 248 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC110056.1-201ENST00000525759 911 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC021269.1-201ENST00000526860 705 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC027369.5-201ENST00000533838 755 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 BTG1P1-201ENST00000540396 508 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC026898.1-201ENST00000586404 571 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AP001823.1-201ENST00000604056 1003 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 RPSAP75-201ENST00000605848 301 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AL645933.2-201ENST00000606743 1207 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AL365181.4-201ENST00000609800 547 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.19□□□□□ -1.74
HLA-DQA1P01909 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HLA-DQA1P01909 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms