Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NDUFS3O75489 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NDUFS3O75489 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.74□□□□□ -1.49
NDUFS3O75489 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.74□□□□□ -1.49
NDUFS3O75489 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NDUFS3O75489 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 AC003985.2-201ENST00000562268 1669 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 SUGT1P2-201ENST00000379452 992 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 ST13P16-201ENST00000401760 781 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 OR2W4P-201ENST00000406496 926 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 MRPL53P1-201ENST00000414323 319 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.73□□□□□ -1.49
NDUFS3O75489 RNGTTP1-201ENST00000420965 728 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 MTND4P15-201ENST00000437913 1033 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.73□□□□□ -1.49
NDUFS3O75489 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 RPS23P2-201ENST00000463671 415 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.73□□□□□ -1.49
NDUFS3O75489 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 AP001804.2-201ENST00000533932 910 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.73□□□□□ -1.49
NDUFS3O75489 MIR4420-201ENST00000583944 77 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.73□□□□□ -1.49
NDUFS3O75489 AC021422.1-201ENST00000621212 473 ntBASIC5.73□□□□□ -1.49
NDUFS3O75489 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.73□□□□□ -1.49
NDUFS3O75489 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NDUFS3O75489 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.73□□□□□ -1.49
NDUFS3O75489 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
NDUFS3O75489 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.72□□□□□ -1.49
NDUFS3O75489 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NDUFS3O75489 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AL442128.2-201ENST00000620246 1824 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AL360270.2-201ENST00000562952 5985 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NDUFS3O75489 RNU4-39P-201ENST00000362455 127 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 U3.10-201ENST00000364459 214 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 VN1R12P-201ENST00000403778 876 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AC099535.1-201ENST00000408928 371 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 RN7SKP279-201ENST00000411383 298 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AL357752.1-201ENST00000412817 349 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 SETP10-201ENST00000424368 814 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.72□□□□□ -1.49
NDUFS3O75489 MTND4LP14-201ENST00000429447 288 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.72□□□□□ -1.49
NDUFS3O75489 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.72□□□□□ -1.49
NDUFS3O75489 MTND6P32-201ENST00000457611 483 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.72□□□□□ -1.49
NDUFS3O75489 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.72□□□□□ -1.49
NDUFS3O75489 RPL37P23-201ENST00000492641 294 ntBASIC5.72□□□□□ -1.49
NDUFS3O75489 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.72□□□□□ -1.49
NDUFS3O75489 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms