Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 ARL4AP1-201ENST00000503220 705 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC008837.2-201ENST00000513076 418 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 RNA5SP271-201ENST00000516700 88 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 Y_RNA.695-201ENST00000516715 107 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 IGKV2-19-201ENST00000518132 283 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 IGKV3D-25-201ENST00000519599 235 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC092747.2-201ENST00000545069 983 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AGGF1P7-201ENST00000562369 913 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 MIR4666A-201ENST00000580160 79 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AL035410.2-201ENST00000604963 864 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC073429.2-201ENST00000569694 1444 ntBASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TMEM88BA6NKF7 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 RNA5SP172-201ENST00000365061 118 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SUGT1P2-201ENST00000379452 992 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 OR5H15-201ENST00000383696 930 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 RN7SKP286-201ENST00000410894 299 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 RPL34P19-201ENST00000415903 342 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 MRPS36P1-201ENST00000421291 307 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 GTF3AP5-201ENST00000442645 697 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 HMGB1P16-201ENST00000447155 540 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 GAPDHP39-201ENST00000481866 979 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC117395.1-201ENST00000487390 403 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 CCDC11P1-201ENST00000503137 1162 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC079395.1-201ENST00000510981 262 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 NIFKP8-201ENST00000560500 874 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AL390726.5-202ENST00000564800 256 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC040162.2-201ENST00000573092 157 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 RN7SL404P-201ENST00000582421 281 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AL353726.1-201ENST00000614041 1000 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC016769.4-201ENST00000616893 535 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SNORA16A-202ENST00000628458 135 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC090582.1-201ENST00000636321 199 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 SHQ1P1-201ENST00000437111 1544 ntBASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
TMEM88BA6NKF7 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms