Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC103591.2-201ENST00000265259 766 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 RNU6-331P-201ENST00000384724 107 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 USP9YP27-201ENST00000418455 438 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC005189.1-201ENST00000431286 310 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 RPL12P40-201ENST00000467028 488 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 TRBV8-1-201ENST00000481590 279 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC108078.1-201ENST00000508073 725 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AP001893.2-201ENST00000526949 202 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 NDUFA3P2-201ENST00000531434 232 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 MIR3912-201ENST00000577566 105 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 MIR4503-201ENST00000582187 83 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC007136.1-201ENST00000589141 199 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 AC108451.2-201ENST00000603875 538 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 BNIP3P10-201ENST00000605360 577 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
HPS5Q9UPZ3 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 DDX50P1-201ENST00000438163 2400 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC009220.2-201ENST00000489759 1751 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AL669831.5-218ENST00000591702 1873 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 OR5P1P-201ENST00000299512 925 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 Y_RNA.401-201ENST00000383965 117 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 PTMAP8-201ENST00000397729 342 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 DNAJC19P6-201ENST00000401853 280 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 OR4K12P-201ENST00000406538 961 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 PRELID1P2-201ENST00000407805 396 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AL035410.1-201ENST00000427409 427 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 IGLV3-4-201ENST00000432300 244 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 RBMY3AP-201ENST00000449381 1145 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 HMGB1P5-202ENST00000451497 985 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 FGF7P3-201ENST00000454645 303 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC105918.1-201ENST00000474399 838 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC098818.1-201ENST00000478593 252 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AL135978.1-201ENST00000553618 1266 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 MTCYBP13-201ENST00000578634 1093 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 RN7SL753P-201ENST00000581238 290 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 MIR4271-201ENST00000582451 67 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC005518.2-201ENST00000603254 282 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 U47924.1-201ENST00000606539 434 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AP001506.1-201ENST00000615444 211 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC099667.1-201ENST00000624222 469 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 AC079228.1-201ENST00000624774 1049 ntBASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
HPS5Q9UPZ3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms