Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AF001550.2-201ENST00000636643 217 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AC099654.14-201ENST00000638599 341 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 AL512662.1-201ENST00000624850 2251 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 Z97832.2-201ENST00000605896 4261 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 ELF2P3-201ENST00000445099 1506 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 ATP5BP1-201ENST00000411980 1574 ntBASIC8.55□□□□□ -1.04
ZC3H4Q9UPT8 RNU6-931P-201ENST00000363850 107 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RN7SKP206-201ENST00000410823 293 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RPL26P37-201ENST00000411983 438 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RPL12P16-201ENST00000431098 498 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL954705.1-201ENST00000435277 559 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL353898.1-201ENST00000444055 238 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC010587.2-201ENST00000511727 448 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 NTS-203ENST00000551529 801 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ANP32BP3-201ENST00000559213 706 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ANP32BP1-202ENST00000568553 737 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC007497.1-201ENST00000610421 561 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC004241.2-201ENST00000614562 444 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC126177.8-201ENST00000618339 1015 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC015726.3-201ENST00000624501 418 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC005539.1-201ENST00000443768 1479 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 EIF3EP1-201ENST00000433978 1316 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RNU6-560P-201ENST00000364007 108 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RNU6-353P-201ENST00000364266 108 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RNA5SP279-201ENST00000365513 117 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL512430.2-201ENST00000406786 339 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 RPS15AP38-201ENST00000413110 372 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 PAICSP7-201ENST00000419829 962 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 B3GNT2P1-201ENST00000434960 952 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 GAPDHP59-201ENST00000435908 267 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.54□□□□□ -1.04
ZC3H4Q9UPT8 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms