Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL449283.1-201ENST00000602631 3403 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 RNU6-1159P-201ENST00000362933 107 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 Y_RNA.152-201ENST00000363578 100 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 RNU6-522P-201ENST00000364497 107 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SNORD116-23-201ENST00000384645 92 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL590806.1-201ENST00000415818 853 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC116050.1-206ENST00000423774 213 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC019097.1-201ENST00000424783 735 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL606752.1-201ENST00000435442 666 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL359711.1-201ENST00000441999 123 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC011742.2-201ENST00000443818 352 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC105399.1-202ENST00000447303 205 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 GAPDHP14-201ENST00000450472 937 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC110749.1-201ENST00000462007 357 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC023194.2-201ENST00000465398 406 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC126389.1-201ENST00000477436 290 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC116655.1-201ENST00000508324 901 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC002456.2-201ENST00000509356 380 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 RNU6-273P-201ENST00000516937 96 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC012400.1-201ENST00000518452 381 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC090572.1-201ENST00000519251 160 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC022360.1-201ENST00000521058 340 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AP003385.6-201ENST00000531603 374 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SSU72P6-201ENST00000532644 488 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 GNAI2P1-201ENST00000541815 315 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC126323.4-201ENST00000566935 234 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SLC6A21P-201ENST00000599458 369 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FAM30B-201ENST00000611556 397 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC012409.4-201ENST00000612923 249 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AL354854.1-201ENST00000455940 1363 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 CDY15P-201ENST00000421995 1570 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AC145207.5-201ENST00000582866 2682 ntBASIC8.17□□□□□ -1.1
LHX6Q9UPM6 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LHX6Q9UPM6 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms