Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 PABPC1P6-201ENST00000445594 1829 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 MIR937-201ENST00000401271 86 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AC090058.1-201ENST00000498788 435 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 OR8Q1P-201ENST00000526467 655 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AC233699.1-201ENST00000569955 1168 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AL021707.7-201ENST00000607991 416 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 AL139407.1-201ENST00000613826 1175 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 CYP4F35P-202ENST00000636121 390 ntBASIC5.34□□□□□ -1.55
CCDC88CQ9P219 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC88CQ9P219 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 AC004014.2-201ENST00000623718 5122 ntBASIC5.34□□□□□ -1.56
CCDC88CQ9P219 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC88CQ9P219 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 NIFKP3-201ENST00000417799 865 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC087783.2-201ENST00000605070 562 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AL118522.2-201ENST00000616045 615 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC089998.1-201ENST00000548575 3141 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 MARK2P12-201ENST00000420129 585 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 RPS7P3-201ENST00000443360 580 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 DPPA3P2-202ENST00000557188 1219 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AP000864.1-201ENST00000609424 650 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC021766.1-201ENST00000624404 741 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 AC109780.1-201ENST00000451768 1344 ntBASIC5.33□□□□□ -1.56
CCDC88CQ9P219 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC88CQ9P219 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AP004607.3-201ENST00000530354 3915 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 GAPDHP24-201ENST00000328713 983 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 RNA5SP30-201ENST00000365552 115 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 VDAC2P4-201ENST00000452925 711 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AZGP1P2-201ENST00000454506 345 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL603882.1-201ENST00000463059 681 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL133445.1-201ENST00000467051 452 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 OR2AO1P-201ENST00000476497 403 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AC022215.1-201ENST00000481770 362 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AC130364.2-201ENST00000528639 604 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AP005403.1-201ENST00000579720 229 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.32□□□□□ -1.56
CCDC88CQ9P219 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC88CQ9P219 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms