Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AP001541.1-201ENST00000623322 1904 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RNA5SP232-201ENST00000364144 119 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RNU6-481P-201ENST00000384194 107 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC005522.1-201ENST00000395416 346 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 VIM2P-201ENST00000402383 1294 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 GSTA12P-201ENST00000402398 508 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RPL5P19-201ENST00000404228 893 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RNA5SP155-201ENST00000411154 129 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 GLUD1P9-201ENST00000420997 1173 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RPL7AP51-201ENST00000422016 760 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL590399.2-201ENST00000427536 309 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL160175.1-201ENST00000428124 247 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RPS7P2-201ENST00000435134 607 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 ARF4P4-201ENST00000439608 520 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 EIF5AP4-201ENST00000441206 465 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 COL11A2P1-205ENST00000441798 676 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 GAPDHP37-201ENST00000442317 968 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC093166.3-201ENST00000448785 303 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RPL7L1P3-201ENST00000455249 689 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL122001.1-201ENST00000457027 370 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RPL21P47-201ENST00000483696 477 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 TPRX1P1-201ENST00000557620 319 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC007448.1-201ENST00000582714 234 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC002487.1-201ENST00000604565 994 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC114477.1-201ENST00000605097 605 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC099785.1-201ENST00000605697 437 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 MIR6071-201ENST00000616741 78 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 CASC19-274ENST00000642018 970 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL359715.3-201ENST00000569267 2123 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
AMBRA1Q9C0C7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
AMBRA1Q9C0C7 ZNF90P1-201ENST00000480493 1951 ntBASIC5.84□□□□□ -1.48
AMBRA1Q9C0C7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.84□□□□□ -1.48
AMBRA1Q9C0C7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.84□□□□□ -1.48
AMBRA1Q9C0C7 AC217777.1-201ENST00000570034 1471 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC140134.1-201ENST00000511830 3544 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 SNORD16-201ENST00000362803 99 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 RNU1-65P-201ENST00000363919 148 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 RN7SKP171-201ENST00000364417 303 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 SNORD65-201ENST00000391079 73 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 RPL12P16-201ENST00000431098 498 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC128677.1-201ENST00000436016 442 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AL020997.1-201ENST00000446554 349 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 RBMY2HP-201ENST00000457961 720 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms