Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BX005019.1-201ENST00000561881 1810 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 HSPD1P9-201ENST00000420325 1636 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AL137100.1-201ENST00000556703 1620 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC100871.1-201ENST00000507871 1456 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 FAM133CP-201ENST00000332869 704 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 STAG3L4-201ENST00000352103 530 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 SNORA62.2-201ENST00000364672 152 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RNU12-2P-201ENST00000364789 156 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 SNORA70.5-201ENST00000365519 135 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 MIR187-201ENST00000385062 109 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 ARSFP1-201ENST00000398758 477 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RPL7P58-201ENST00000402913 758 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AL356131.1-201ENST00000405826 414 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC114402.2-201ENST00000432760 643 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 HMGB1P45-201ENST00000435986 653 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 CYCSP11-201ENST00000436426 315 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC007327.1-201ENST00000447461 264 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 NECAP1P2-201ENST00000455668 727 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 SRP68P2-201ENST00000456184 254 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 MED28P7-201ENST00000456611 530 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RNU7-27P-201ENST00000459281 62 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC010468.1-201ENST00000461022 817 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RPL23AP8-201ENST00000479812 475 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RN7SL741P-201ENST00000482473 289 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RN7SL849P-201ENST00000485236 295 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RN7SL655P-201ENST00000486087 298 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 SNORA58-201ENST00000505219 137 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC124293.1-201ENST00000530034 493 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 NDUFA3P4-201ENST00000560814 250 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 MIR5682-201ENST00000584864 76 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC092032.1-201ENST00000603090 165 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 TRIM53CP-201ENST00000531490 1354 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 MFSD8-256ENST00000641949 1640 ntBASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM55Q9BYV6 CCDC150P1-201ENST00000537123 2215 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 RNA5SP114-201ENST00000363780 113 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 RN7SKP47-201ENST00000365347 328 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 AL451142.1-201ENST00000375867 775 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 SNORA70H-201ENST00000383910 135 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 SNORA70J-201ENST00000384182 135 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 MIR525-201ENST00000384978 85 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 MIR551B-201ENST00000384984 96 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 RNU1-56P-201ENST00000391303 164 ntBASIC6.78□□□□□ -1.32
TRIM55Q9BYV6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms