Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC114322.1-201ENST00000506771 926 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 RN7SKP34-201ENST00000516142 244 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 OR6M2P-201ENST00000529831 871 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC023825.1-201ENST00000566704 1030 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC068020.1-201ENST00000594215 661 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC130352.1-201ENST00000602979 661 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC012368.3-201ENST00000604190 219 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC245100.7-201ENST00000609678 442 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 LINC01613-201ENST00000561476 2780 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC018628.1-201ENST00000624147 3819 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 RNA5SP77-201ENST00000365394 120 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AL672167.2-201ENST00000377164 879 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AL139805.1-201ENST00000407837 289 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 UBE2V1P11-201ENST00000411559 285 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AL158825.1-201ENST00000414735 521 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 Z82198.3-201ENST00000421145 199 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 FO393414.1-201ENST00000428697 1184 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 NDUFA5P10-201ENST00000432147 357 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 GAPDHP23-201ENST00000444823 993 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 RARRES2P3-201ENST00000457739 473 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC020779.1-201ENST00000478757 796 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 SNX18P24-201ENST00000505249 671 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC133963.2-201ENST00000513686 578 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 CYP4F27P-201ENST00000514557 494 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 Y_RNA.710-201ENST00000516975 110 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AP001858.2-201ENST00000536213 601 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC092865.1-201ENST00000544395 1023 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC019131.2-201ENST00000609071 870 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC241377.1-201ENST00000619797 406 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 AC245100.2-201ENST00000454544 1679 ntBASIC6.06□□□□□ -1.44
TRIM54Q9BYV2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms