Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 OR4A40P-201ENST00000533878 948 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL121579.1-201ENST00000555129 305 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 HMGN1P26-201ENST00000558737 303 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC092325.1-201ENST00000566449 554 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ISCA1P3-201ENST00000577104 373 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 MIR378C-201ENST00000578683 81 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 MIR4999-201ENST00000585029 91 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 U73023.1-201ENST00000603134 700 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC007255.2-201ENST00000604053 631 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ELOCP34-201ENST00000604436 327 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL451074.6-201ENST00000608512 729 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC004067.1-201ENST00000608733 700 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC063943.3-201ENST00000615562 356 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC005840.5-201ENST00000619166 599 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 MRPL57P3-201ENST00000619218 176 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC016717.3-201ENST00000624730 554 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 OR5AK4P-201ENST00000635912 903 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC011471.4-201ENST00000638271 216 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC099654.15-201ENST00000639802 509 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL596275.2-203ENST00000641951 371 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 RAD17P2-201ENST00000451754 1977 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL121949.2-201ENST00000403446 1548 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC5.77□□□□□ -1.48
SSBP3Q9BWW4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.48
SSBP3Q9BWW4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 ATP5BP1-201ENST00000411980 1574 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AL356317.1-201ENST00000396110 1436 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 U3.4-201ENST00000363352 213 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RN7SKP189-201ENST00000365042 330 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 Y_RNA.465-201ENST00000384293 102 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RN7SKP62-201ENST00000384539 329 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 HMGB1P10-201ENST00000395823 563 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC136624.1-201ENST00000400791 413 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RNU2-17P-201ENST00000410290 190 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RNU6-920P-201ENST00000410926 92 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC244452.1-201ENST00000413798 141 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC122718.1-201ENST00000439448 744 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 FDX1P2-201ENST00000450769 375 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC004890.1-201ENST00000461005 181 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 FAM133DP-201ENST00000464802 691 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC090058.1-201ENST00000498788 435 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 MYL12BP2-201ENST00000503948 512 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RNA5SP318-201ENST00000516352 92 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 RNU6-405P-201ENST00000516637 110 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC113191.1-201ENST00000517759 403 ntBASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.77□□□□□ -1.49
SSBP3Q9BWW4 BGLT3-201ENST00000564523 994 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms