Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RN7SKP148-201ENST00000410179 275 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 RNU2-42P-201ENST00000410697 113 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC244452.1-201ENST00000413798 141 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC019050.1-201ENST00000418508 492 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC009500.1-201ENST00000420684 583 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 RPL7P44-201ENST00000424827 742 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 Z93242.1-201ENST00000427102 353 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AL050321.1-201ENST00000432363 400 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC013403.1-201ENST00000436954 263 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC009518.3-201ENST00000438972 253 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AL354714.5-201ENST00000450131 590 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 MTND2P28-201ENST00000457540 1044 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 RN7SL790P-201ENST00000474043 298 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 RN7SL655P-201ENST00000486087 298 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC113191.1-201ENST00000517759 403 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC131935.1-201ENST00000524621 333 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 OR5AZ1P-201ENST00000527448 943 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AL355333.1-201ENST00000605632 279 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC004948.1-201ENST00000609858 672 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AF246928.1-201ENST00000623768 87 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC022031.1-201ENST00000585985 2593 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 CCDC150P1-201ENST00000537123 2215 ntBASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.75□□□□□ -1.17
TRAIPQ9BWF2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 TRIM51GP-201ENST00000534741 1350 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC034229.2-201ENST00000566945 2508 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 Y_RNA.318-201ENST00000365131 97 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 RNU6-1055P-201ENST00000391085 107 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AL034417.1-201ENST00000399343 800 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 RPL24P7-201ENST00000399435 453 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 HNRNPDP2-201ENST00000406475 478 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AL133264.1-201ENST00000407157 562 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 RN7SKP254-201ENST00000410685 310 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 RN7SKP91-201ENST00000410852 288 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 TPT1P2-201ENST00000413105 503 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 GSTA7P-201ENST00000438425 448 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 MTCYBP3-201ENST00000445588 1137 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 CFL1P4-201ENST00000451536 498 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 MTCO3P11-201ENST00000455103 774 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC005229.2-201ENST00000456995 399 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 VN1R6P-201ENST00000458417 907 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 OR7E157P-201ENST00000494376 911 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC091435.1-201ENST00000505442 584 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC008868.1-201ENST00000509786 737 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 RNU6-759P-201ENST00000516740 103 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 RNU6-678P-201ENST00000516832 109 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 OR7E154P-201ENST00000525174 932 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC069240.2-201ENST00000550242 609 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 HMGN1P26-201ENST00000558737 303 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC115085.1-201ENST00000588924 229 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC009955.2-201ENST00000597288 542 ntBASIC7.74□□□□□ -1.17
TRAIPQ9BWF2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms