Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 AC099654.3-201ENST00000447087 1546 ntBASIC5.78□□□□□ -1.48
C9orf72Q96LT7 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.78□□□□□ -1.48
C9orf72Q96LT7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.78□□□□□ -1.48
C9orf72Q96LT7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
C9orf72Q96LT7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.77□□□□□ -1.48
C9orf72Q96LT7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.77□□□□□ -1.48
C9orf72Q96LT7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC006206.1-201ENST00000544842 3387 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 U3.23-201ENST00000391132 200 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 NPM1P37-201ENST00000403105 874 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 RN7SKP206-201ENST00000410823 293 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 GPS2P1-201ENST00000411761 986 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC079809.1-201ENST00000415468 276 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 NIFKP3-201ENST00000417799 865 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 BX323845.3-201ENST00000428215 527 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC099521.1-201ENST00000482557 334 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 OR4A17P-201ENST00000526032 904 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AGGF1P7-201ENST00000562369 913 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC027216.1-201ENST00000577726 685 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AL162574.1-201ENST00000615702 950 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C9orf72Q96LT7 AP001284.1-201ENST00000528393 2118 ntBASIC5.77□□□□□ -1.49
C9orf72Q96LT7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 TMSB4XP4-201ENST00000323496 618 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL512422.1-201ENST00000407033 553 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC245060.4-201ENST00000413293 1121 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL512637.1-201ENST00000439523 1231 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL445665.1-202ENST00000452436 324 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 UBFD1P1-201ENST00000473259 814 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 RN7SL101P-201ENST00000496350 279 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 RN7SKP253-201ENST00000516424 309 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 OR4A43P-201ENST00000532938 908 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC122688.1-201ENST00000541494 223 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL356801.1-201ENST00000559320 294 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC011445.2-201ENST00000599274 173 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC010632.3-201ENST00000611377 369 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms