Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC00622-201ENST00000562811 1570 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC012467.2-201ENST00000607783 2583 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC013444.1-201ENST00000428909 1904 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC067945.1-201ENST00000342609 618 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 SNORA22B-201ENST00000383876 138 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 SNORA30-201ENST00000384028 129 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 Y_RNA.476-201ENST00000384347 108 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC084880.1-201ENST00000392530 545 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC025750.1-201ENST00000399891 379 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 PSMA6P1-201ENST00000400275 741 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 RBMY2GP-201ENST00000418671 1034 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 RBMY2NP-201ENST00000434454 1028 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AL354714.5-201ENST00000450131 590 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 RPL12P40-201ENST00000467028 488 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC027575.1-201ENST00000481064 460 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC021220.1-201ENST00000507445 630 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 SNORA81.2-201ENST00000516868 170 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 RNU6-1271P-201ENST00000517049 105 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC090287.1-201ENST00000578374 291 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC024267.2-201ENST00000582737 417 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 RPL23AP77-201ENST00000588044 463 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC009597.2-201ENST00000604659 592 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC037198.3-201ENST00000616754 526 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC211486.4-201ENST00000621495 113 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AC110994.2-201ENST00000635481 492 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 AL031985.3-201ENST00000565390 2449 ntBASIC8.43□□□□□ -1.06
LRCH3Q96II8 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LRCH3Q96II8 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LRCH3Q96II8 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC009148.1-201ENST00000570148 2693 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 Y_RNA.97-201ENST00000363094 102 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 Y_RNA.481-201ENST00000384373 102 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 RN7SKP29-201ENST00000410957 272 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AL358942.1-201ENST00000418595 1178 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 HMGB3P12-201ENST00000438745 556 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 RPS10P18-201ENST00000442662 495 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LRCH3Q96II8 C1DP4-201ENST00000455429 424 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC010655.3-201ENST00000478818 450 ntBASIC8.42□□□□□ -1.06
LRCH3Q96II8 AC107398.1-201ENST00000486904 505 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms