Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPS12P17-201ENST00000438591 377 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 RPL5P7-201ENST00000444235 813 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AC093166.3-201ENST00000448785 303 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 TVP23BP2-201ENST00000455082 615 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 RN7SL269P-201ENST00000467795 305 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 RPL23AP40-201ENST00000487630 390 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 RPL37P23-201ENST00000492641 294 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 TOMM22P4-201ENST00000511318 336 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 RN7SKP288-201ENST00000516227 268 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC004923.2-201ENST00000529649 369 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.64□□□□□ -1.35
HPS3Q969F9 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AP005119.1-201ENST00000580956 292 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AC105105.5-201ENST00000622635 1294 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 AC068880.4-201ENST00000623082 495 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 AL445984.1-201ENST00000637834 659 ntBASIC6.64□□□□□ -1.35
HPS3Q969F9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HPS3Q969F9 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HPS3Q969F9 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
HPS3Q969F9 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HPS3Q969F9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.64□□□□□ -1.35
HPS3Q969F9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
HPS3Q969F9 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HPS3Q969F9 RNU1-59P-201ENST00000364829 162 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.63□□□□□ -1.35
HPS3Q969F9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 RPL23AP17-201ENST00000401064 499 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 MIR1282-201ENST00000408865 101 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 RNA5SP431-201ENST00000410312 120 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 RN7SKP166-201ENST00000410812 305 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 AC245096.1-201ENST00000413104 546 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 MTND4P11-201ENST00000417020 1058 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.63□□□□□ -1.35
HPS3Q969F9 RPL12P12-201ENST00000424633 501 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 USP24P1-201ENST00000433802 779 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 RPS3AP38-201ENST00000435889 763 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.63□□□□□ -1.35
HPS3Q969F9 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 AC105420.1-201ENST00000504389 582 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.63□□□□□ -1.35
HPS3Q969F9 RN7SKP238-201ENST00000516483 249 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AC116158.1-201ENST00000560231 2129 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.63□□□□□ -1.35
HPS3Q969F9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AL583832.1-201ENST00000603227 784 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 AC112503.2-201ENST00000609005 552 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.63□□□□□ -1.35
HPS3Q969F9 U1.25-201ENST00000614085 162 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 MIR8084-201ENST00000614105 89 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HPS3Q969F9 U1.34-201ENST00000618578 162 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 U1.31-201ENST00000620022 160 ntBASIC6.63□□□□□ -1.35
HPS3Q969F9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.63□□□□□ -1.35
HPS3Q969F9 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms