Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTP4A1Q93096 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 RNA5SP198-201ENST00000410376 127 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AL359885.1-201ENST00000415786 903 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AL356806.1-201ENST00000422524 916 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 CACYBPP1-201ENST00000438592 684 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC015983.1-201ENST00000441577 373 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AL606490.8-201ENST00000441624 319 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 RPSAP40-201ENST00000442343 891 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 ZNF619P1-201ENST00000446539 752 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 MORF4L1P4-201ENST00000450245 976 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 FRG2FP-204ENST00000453982 852 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 RPL5P13-201ENST00000462840 709 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AL603882.1-201ENST00000463059 681 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 RPL9P15-201ENST00000491096 532 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 RN7SL568P-201ENST00000493069 298 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 RN7SL362P-201ENST00000494228 267 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC113367.2-201ENST00000505749 160 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 GUSBP9-201ENST00000510138 584 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 SNX18P25-201ENST00000510539 758 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 HMGB1P47-201ENST00000511281 589 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 OR56A7P-201ENST00000524865 941 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 HMGB1P42-201ENST00000532126 553 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC090826.1-203ENST00000569235 490 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC138207.8-204ENST00000579588 527 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 AC004076.2-201ENST00000620532 3323 ntBASIC5.35□□□□□ -1.55
PTP4A1Q93096 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PTP4A1Q93096 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTP4A1Q93096 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 OR10R3P-201ENST00000361688 942 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 RNU1-74P-201ENST00000384108 171 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 MIR188-201ENST00000385034 86 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 EI24P3-201ENST00000399046 1062 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 RNA5SP156-201ENST00000410250 110 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 METTL15P3-201ENST00000415522 1221 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AL590806.1-201ENST00000415818 853 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 RPL35AP31-201ENST00000418340 337 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 RPS27AP6-201ENST00000427962 448 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 RPSAP32-201ENST00000432681 526 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AL591363.1-201ENST00000450091 483 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 OR7E22P-201ENST00000478335 1035 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 PDCL3P4-201ENST00000489621 720 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 ZNF519P4-201ENST00000514008 125 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 NPM1P35-201ENST00000533043 868 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.34□□□□□ -1.55
PTP4A1Q93096 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTP4A1Q93096 AC126615.2-201ENST00000553003 515 ntBASIC5.34□□□□□ -1.55
PTP4A1Q93096 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms