Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 AC114786.2-201ENST00000510090 1426 ntBASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
DEPDC4Q8N2C3 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC074198.1-201ENST00000506546 1397 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 RNF6P1-201ENST00000444889 1784 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 NPM1P46-201ENST00000399556 865 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 RNU4-55P-201ENST00000410731 137 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 OR10U1P-201ENST00000414690 905 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 NUP35P2-201ENST00000416748 943 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AL158073.1-201ENST00000426848 1104 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 RPL3P8-201ENST00000432928 1191 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 EIF3IP1-201ENST00000433048 967 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ACTBP12-201ENST00000435871 418 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 FDX1P2-201ENST00000450769 375 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 VN1R6P-201ENST00000458417 907 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC023598.1-201ENST00000472521 361 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC097173.1-201ENST00000505862 819 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC093809.1-201ENST00000509155 340 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 IGLV7-35-201ENST00000523314 340 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AL512310.1-201ENST00000548639 172 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ZNF322P1-201ENST00000568013 1209 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 MIR3682-201ENST00000581338 84 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC103792.1-201ENST00000603591 919 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC018926.2-201ENST00000611214 498 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 MIR6872-201ENST00000612981 62 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC116563.2-201ENST00000624751 535 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 AC068205.4-201ENST00000637880 804 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 PRNCR1-201ENST00000635449 12727 ntBASIC7.33□□□□□ -1.24
DEPDC4Q8N2C3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
DEPDC4Q8N2C3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms