Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RN7SKP275-201ENST00000364626 301 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 SNORD65-201ENST00000391079 73 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 RPL10P10-201ENST00000403509 664 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 NMD3P2-201ENST00000421815 761 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 CUBNP2-201ENST00000443534 1139 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 CCRL1P1-201ENST00000449542 1053 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 SEC11B-201ENST00000518383 499 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AC010487.1-201ENST00000594408 1172 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AL136228.1-201ENST00000622221 319 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 AL118508.4-201ENST00000624142 1176 ntBASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUP54Q7Z3B4 NXF4-202ENST00000416098 1465 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 RNU6-1251P-201ENST00000364502 107 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 OOSP1-201ENST00000398992 1270 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 OR7E156P-201ENST00000400303 464 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 SNRPEP6-201ENST00000407465 277 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 RPL35AP3-201ENST00000414680 288 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC007064.3-201ENST00000422608 359 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AJ239321.1-201ENST00000424255 564 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC115283.1-201ENST00000427353 400 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 RPL12P16-201ENST00000431098 498 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC069277.2-201ENST00000454211 432 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 OR52A4P-202ENST00000481634 799 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 RNA5SP340-201ENST00000517132 107 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AL163952.1-202ENST00000569625 600 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 MIR132-201ENST00000591554 101 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 SNX6P1-201ENST00000601728 1224 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AL021368.1-201ENST00000607490 540 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC108673.3-201ENST00000609183 335 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 RMST_5.1-201ENST00000618704 126 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 PSG10P-201ENST00000501199 1500 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms