Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 RPL37AP8-201ENST00000494116 276 ntBASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 EIF3KP3-201ENST00000514461 639 ntBASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 AC122688.1-201ENST00000541494 223 ntBASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.13□□□□□ -1.11
CCDC141Q6ZP82 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AC005225.5-201ENST00000623547 2225 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 RNVU1-6-201ENST00000364688 164 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 EI24P4-201ENST00000423683 1078 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 RIMKLBP2-201ENST00000424737 654 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 RPS11P7-201ENST00000442125 465 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AC009962.1-201ENST00000567327 3813 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 AP003789.1-201ENST00000617737 605 ntBASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
CCDC141Q6ZP82 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AC006600.2-201ENST00000624834 2506 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AC018809.2-201ENST00000602436 3823 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AC068870.1-201ENST00000563737 2455 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 SNORD56.6-201ENST00000384569 71 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 OR10T1P-201ENST00000424327 947 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AC109464.1-201ENST00000511091 819 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 AC134349.2-201ENST00000535136 910 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 YWHABP2-201ENST00000540201 713 ntBASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CCDC141Q6ZP82 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 AC211486.3-201ENST00000412694 621 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 DDX39BP1-205ENST00000422507 192 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 AL360081.1-201ENST00000428299 555 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 AC105420.1-201ENST00000504389 582 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 AC004980.4-201ENST00000513375 203 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 RN7SKP147-201ENST00000517154 244 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 OR11H3P-201ENST00000554547 982 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 AC135068.5-201ENST00000624197 983 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms