Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.74□□□□□ -1.33
RFX7Q2KHR2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.74□□□□□ -1.33
RFX7Q2KHR2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 C4BPAP1-201ENST00000415474 1893 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 RNU11-201ENST00000387069 134 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AZGP1P2-201ENST00000454506 345 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC005532.2-201ENST00000467154 373 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC093763.2-201ENST00000505334 1223 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AL360012.1-201ENST00000602813 131 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC008536.1-201ENST00000602872 669 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC010245.2-201ENST00000606908 1167 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC011933.2-201ENST00000578539 2790 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC053481.2-202ENST00000582394 1500 ntBASIC6.73□□□□□ -1.33
RFX7Q2KHR2 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX7Q2KHR2 AC016745.2-201ENST00000608834 3443 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC004076.2-201ENST00000620532 3323 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 RN7SKP28-201ENST00000364770 305 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AL354868.1-201ENST00000417077 482 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 PTMAP6-201ENST00000439110 327 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 RN7SL222P-201ENST00000476452 299 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC090638.1-201ENST00000498296 909 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SEPT10P1-201ENST00000517342 1162 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AP003080.1-202ENST00000526526 915 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC126177.5-201ENST00000549599 178 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 BNIP3P32-201ENST00000600015 554 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AL139124.1-201ENST00000609123 421 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC239803.2-201ENST00000610161 430 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC008115.4-201ENST00000619780 775 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 MT-RNR2-201ENST00000387347 1559 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.72□□□□□ -1.33
RFX7Q2KHR2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RFX7Q2KHR2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms