Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ENSAP3-201ENST00000312710 333 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDH1Q08174 FGF7P2-201ENST00000332473 296 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDH1Q08174 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDH1Q08174 MIR199B-201ENST00000384849 110 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDH1Q08174 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 RN7SKP39-201ENST00000410773 322 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 MTCO1P17-201ENST00000411522 491 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC093107.1-201ENST00000422772 609 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC008753.1-201ENST00000423096 284 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 UQCRHP1-204ENST00000424609 274 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 TMX2P1-201ENST00000436507 708 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 LARP1BP3-201ENST00000437229 869 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 MTND1P16-201ENST00000465177 898 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 TMED11P-201ENST00000479478 690 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 RN7SL88P-201ENST00000480166 299 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 RN7SL306P-201ENST00000492941 296 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 RPS10P20-201ENST00000494130 463 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 PABPC1P1-201ENST00000506347 591 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC074344.1-201ENST00000512823 224 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC114781.4-201ENST00000513707 639 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDH1Q08174 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 FXNP1-201ENST00000555153 337 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 LINC00556-201ENST00000569603 412 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 MIR4666A-201ENST00000580160 79 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 RN7SL667P-201ENST00000582817 298 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH1Q08174 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDH1Q08174 PRR13P3-201ENST00000603578 376 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AP003117.2-201ENST00000606010 545 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AL159169.3-201ENST00000608871 561 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AL357080.1-201ENST00000617394 239 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC069209.1-201ENST00000619282 651 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC012414.7-202ENST00000622705 1090 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC073488.7-201ENST00000633785 778 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 AC099654.14-201ENST00000638599 341 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDH1Q08174 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH1Q08174 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH1Q08174 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDH1Q08174 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 DDX18P6-201ENST00000450119 1997 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDH1Q08174 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AL031651.1-201ENST00000615357 1438 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDH1Q08174 AL672167.2-201ENST00000377164 879 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDH1Q08174 RNU4-31P-201ENST00000384211 141 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.94□□□□□ -1.3
PCDH1Q08174 AP000357.1-201ENST00000409926 1165 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 RN7SKP232-201ENST00000410170 290 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 RPS26P38-201ENST00000414476 348 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 RPL23AP39-201ENST00000415533 405 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.94□□□□□ -1.3
PCDH1Q08174 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms