Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 DBIP1-201ENST00000401435 260 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 MIR1271-201ENST00000408537 86 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AC245291.3-201ENST00000443400 292 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AL031584.1-201ENST00000447169 754 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC097463.1-201ENST00000447288 481 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.61□□□□□ -1.67
SSBP1Q04837 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AL591473.1-201ENST00000464297 313 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.61□□□□□ -1.67
SSBP1Q04837 HMGN1P16-201ENST00000508308 283 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 RNA5SP75-201ENST00000516841 111 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AP003396.4-201ENST00000527574 265 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 HSPE1P2-201ENST00000554777 306 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC006530.1-201ENST00000555980 571 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC091304.5-201ENST00000568969 158 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC063977.5-201ENST00000601044 974 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC018695.5-201ENST00000605872 315 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 Z93930.3-201ENST00000607919 749 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 PCA3_2.1-201ENST00000612507 409 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC015819.1-201ENST00000613588 663 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AC015914.2-201ENST00000618167 288 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 MIR6732-201ENST00000619365 60 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.61□□□□□ -1.67
SSBP1Q04837 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSBP1Q04837 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AL022393.1-201ENST00000625142 1677 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.61□□□□□ -1.67
SSBP1Q04837 AC006600.2-201ENST00000624834 2506 ntBASIC4.61□□□□□ -1.67
SSBP1Q04837 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SSBP1Q04837 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 Y_RNA.209-201ENST00000364156 111 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 SNORA64.3-201ENST00000365647 134 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 SETP15-201ENST00000412724 337 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 OR52N3P-201ENST00000413417 934 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 MRPL53P1-201ENST00000414323 319 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP1Q04837 RPL35AP21-201ENST00000437667 333 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.6□□□□□ -1.67
SSBP1Q04837 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC090638.1-201ENST00000498296 909 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP1Q04837 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
SSBP1Q04837 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP1Q04837 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AL390726.5-202ENST00000564800 256 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AP005262.1-201ENST00000582646 997 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AC024267.2-201ENST00000582737 417 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC025574.2-201ENST00000615621 514 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AC211486.4-201ENST00000621495 113 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AP001962.1-201ENST00000624114 559 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AC099654.6-201ENST00000636487 512 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 IFIT1P1-201ENST00000400497 1449 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 AC093225.1-201ENST00000506867 1408 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 PSG10P-201ENST00000501199 1500 ntBASIC4.6□□□□□ -1.67
SSBP1Q04837 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSBP1Q04837 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.6□□□□□ -1.67
SSBP1Q04837 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms