Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RN7SKP186-201ENST00000365371 303 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 HMGB3P7-201ENST00000400214 611 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC116036.1-201ENST00000412199 367 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 HMGA1P8-201ENST00000414130 321 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 RPS26P13-201ENST00000419030 330 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.98□□□□□ -1.29
RHBDL3P58872 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AL731534.1-201ENST00000434711 269 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 MTCO3P43-201ENST00000440974 771 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.98□□□□□ -1.29
RHBDL3P58872 RPL7L1P3-201ENST00000455249 689 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 AC099521.1-201ENST00000482557 334 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 AL035690.1-201ENST00000490892 383 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 RN7SL466P-201ENST00000497546 295 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.98□□□□□ -1.29
RHBDL3P58872 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 MIR4301-201ENST00000577203 66 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.98□□□□□ -1.29
RHBDL3P58872 MIR132-201ENST00000591554 101 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC135803.1-201ENST00000608748 565 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 AL355974.3-201ENST00000617383 467 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 THAP12P9-201ENST00000503971 2360 ntBASIC6.98□□□□□ -1.29
RHBDL3P58872 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
RHBDL3P58872 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
RHBDL3P58872 AC006511.3-201ENST00000624929 1783 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RHBDL3P58872 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RHBDL3P58872 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 AP003170.5-201ENST00000397185 335 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AL357752.1-201ENST00000412817 349 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AL022331.1-201ENST00000429025 477 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.97□□□□□ -1.29
RHBDL3P58872 CUBNP2-201ENST00000443534 1139 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 EEF1B2P6-201ENST00000445713 673 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 NPM1P19-201ENST00000450070 712 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 FRG2FP-204ENST00000453982 852 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC022215.1-201ENST00000481770 362 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC026782.2-201ENST00000510845 636 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC034244.2-201ENST00000514668 858 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 MRPS16P1-201ENST00000523462 412 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.97□□□□□ -1.29
RHBDL3P58872 HMGB1P42-201ENST00000532126 553 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC244502.2-201ENST00000543361 851 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC122134.1-201ENST00000565664 1104 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC040174.2-201ENST00000602701 465 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 AC079298.2-201ENST00000623885 459 ntBASIC6.97□□□□□ -1.29
RHBDL3P58872 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.97□□□□□ -1.29
RHBDL3P58872 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.97□□□□□ -1.29
RHBDL3P58872 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.97□□□□□ -1.29
RHBDL3P58872 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RHBDL3P58872 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RHBDL3P58872 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.96□□□□□ -1.29
RHBDL3P58872 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RHBDL3P58872 AC130304.1-201ENST00000622942 2385 ntBASIC6.96□□□□□ -1.29
RHBDL3P58872 SMG1P7-201ENST00000565246 2704 ntBASIC6.96□□□□□ -1.29
RHBDL3P58872 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.29
RHBDL3P58872 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RHBDL3P58872 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms