Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 OR2AH1P-202ENST00000641232 2744 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 AC073429.2-201ENST00000569694 1444 ntBASIC6.24□□□□□ -1.41
GFRA1P56159 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.24□□□□□ -1.41
GFRA1P56159 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
GFRA1P56159 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GFRA1P56159 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 AL034417.4-202ENST00000642135 2236 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AL512329.1-201ENST00000404600 1592 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
GFRA1P56159 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 RNU6-316P-201ENST00000391027 107 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 LDHAP5-201ENST00000394996 622 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 OR8V1P-201ENST00000395193 873 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 AL079341.1-201ENST00000404701 1207 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 AL773545.3-201ENST00000414297 706 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 PRUNEP1-201ENST00000425846 705 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 C8orf59P1-201ENST00000429930 303 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 BX119917.1-201ENST00000432517 502 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RPL3P11-201ENST00000434028 1146 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 HMGN1P32-201ENST00000441744 256 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 RPL7P48-201ENST00000461513 746 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RPL5P24-201ENST00000463742 885 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RN7SL390P-201ENST00000470634 284 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RPS14P8-201ENST00000478778 369 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 VPS26AP1-201ENST00000483197 979 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RN7SL350P-201ENST00000492591 299 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 RN7SL143P-201ENST00000496780 297 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 PRELID3BP7-201ENST00000503606 469 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.23□□□□□ -1.41
GFRA1P56159 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC092851.1-201ENST00000535964 478 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.23□□□□□ -1.41
GFRA1P56159 AP002884.5-201ENST00000595053 1132 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 AC111186.1-201ENST00000604684 130 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 AC090525.3-201ENST00000605601 189 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC069209.1-201ENST00000619282 651 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 MIR8089-201ENST00000620165 82 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 AC005899.6-201ENST00000620729 297 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms