Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPL5P25-201ENST00000441148 775 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.8□□□□□ -1.48
NR1H2P55055 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 RARRES2P3-201ENST00000457739 473 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.8□□□□□ -1.48
NR1H2P55055 SYT14P1-201ENST00000481459 721 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 MTND3P3-201ENST00000505004 126 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AC093870.1-201ENST00000506837 213 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 ASNSP4-201ENST00000511103 447 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 snoU109.5-201ENST00000516231 132 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.8□□□□□ -1.48
NR1H2P55055 AC027216.1-201ENST00000577726 685 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 AC016542.1-201ENST00000608259 493 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AL136097.3-201ENST00000611097 505 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 AL512506.1-201ENST00000613918 449 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AC006840.1-201ENST00000623069 542 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AC061999.1-201ENST00000624454 177 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AC003992.1-201ENST00000635364 557 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NR1H2P55055 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 RNFT1P3-201ENST00000340898 1052 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 RNU6-609P-201ENST00000365459 107 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 RNA5SP187-201ENST00000384400 119 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AL359694.1-201ENST00000403247 604 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 RPL12P23-201ENST00000405880 490 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NR1H2P55055 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.79□□□□□ -1.48
NR1H2P55055 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 PTP4A1P3-201ENST00000433661 420 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 NPM1P18-201ENST00000434232 732 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC016724.1-201ENST00000453215 421 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC018638.3-201ENST00000461273 132 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 NPM1P17-201ENST00000479221 602 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 TRBV5-2-201ENST00000489095 273 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 RPL23AP73-201ENST00000492507 471 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 PFN1P8-201ENST00000497012 543 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC112484.3-201ENST00000505910 329 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC093664.1-201ENST00000511779 289 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC111000.6-201ENST00000514471 709 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC112206.4-201ENST00000515142 405 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 RNA5SP400-201ENST00000517155 111 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 OR4R2P-201ENST00000530815 597 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 RPL3P13-201ENST00000550415 216 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC009120.3-201ENST00000563335 499 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC079148.1-201ENST00000565944 819 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.79□□□□□ -1.48
NR1H2P55055 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC060780.2-201ENST00000589047 198 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.79□□□□□ -1.48
NR1H2P55055 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.79□□□□□ -1.48
NR1H2P55055 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 RN7SL261P-201ENST00000613441 282 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.79□□□□□ -1.48
NR1H2P55055 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NR1H2P55055 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms