Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NEK3P51956 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NEK3P51956 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
NEK3P51956 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NEK3P51956 AL606537.1-201ENST00000607258 2011 ntBASIC6.35□□□□□ -1.39
NEK3P51956 GUCY1B2-204ENST00000531898 1979 ntBASIC6.35□□□□□ -1.39
NEK3P51956 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NEK3P51956 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NEK3P51956 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 RNA5SP346-201ENST00000363541 121 ntBASIC6.34□□□□□ -1.39
NEK3P51956 GNG5P2-201ENST00000372054 207 ntBASIC6.34□□□□□ -1.39
NEK3P51956 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NEK3P51956 RNU6-1176P-201ENST00000390955 107 ntBASIC6.34□□□□□ -1.39
NEK3P51956 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 RN7SKP144-201ENST00000411108 279 ntBASIC6.34□□□□□ -1.39
NEK3P51956 RN7SKP108-201ENST00000411367 328 ntBASIC6.34□□□□□ -1.39
NEK3P51956 UBE2V1P11-201ENST00000411559 285 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 OR5W1P-201ENST00000423705 938 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 HSFY7P-201ENST00000432672 318 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 HSFY8P-201ENST00000437934 318 ntBASIC6.34□□□□□ -1.39
NEK3P51956 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 HSFY5P-201ENST00000453726 309 ntBASIC6.34□□□□□ -1.39
NEK3P51956 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 AL133351.3-201ENST00000454998 193 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 AC107398.1-201ENST00000486904 505 ntBASIC6.34□□□□□ -1.39
NEK3P51956 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 AC008945.1-201ENST00000505144 499 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC112518.2-201ENST00000508565 425 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.34□□□□□ -1.39
NEK3P51956 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.34□□□□□ -1.39
NEK3P51956 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC008429.4-201ENST00000521201 182 ntBASIC6.34□□□□□ -1.39
NEK3P51956 C1DP5-201ENST00000525775 383 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC005363.1-201ENST00000530779 351 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC036111.2-201ENST00000533247 901 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 AC016839.1-201ENST00000578162 867 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.34□□□□□ -1.39
NEK3P51956 AC124283.4-201ENST00000581815 456 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AP005136.2-201ENST00000583253 1049 ntBASIC6.34□□□□□ -1.39
NEK3P51956 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.34□□□□□ -1.39
NEK3P51956 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.34□□□□□ -1.39
NEK3P51956 ABI1P1-201ENST00000603375 1120 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC012557.1-201ENST00000607115 611 ntBASIC6.34□□□□□ -1.39
NEK3P51956 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 AC011472.4-201ENST00000615848 491 ntBASIC6.34□□□□□ -1.39
NEK3P51956 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NEK3P51956 AC095038.2-201ENST00000621464 1070 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC074140.1-201ENST00000621617 208 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AL138955.1-201ENST00000622881 1040 ntBASIC6.34□□□□□ -1.39
NEK3P51956 AC068880.4-201ENST00000623082 495 ntBASIC6.34□□□□□ -1.39
NEK3P51956 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.34□□□□□ -1.39
NEK3P51956 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 CASC19-284ENST00000642142 1868 ntBASIC6.34□□□□□ -1.39
NEK3P51956 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEK3P51956 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
NEK3P51956 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NEK3P51956 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.34□□□□□ -1.4
NEK3P51956 AC104966.1-201ENST00000467010 1464 ntBASIC6.34□□□□□ -1.4
NEK3P51956 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NEK3P51956 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NEK3P51956 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 AC011416.1-201ENST00000514947 1732 ntBASIC6.33□□□□□ -1.4
NEK3P51956 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 AC133552.1-201ENST00000569988 4007 ntBASIC6.33□□□□□ -1.4
NEK3P51956 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 AC117409.1-201ENST00000470499 1310 ntBASIC6.33□□□□□ -1.4
NEK3P51956 SAMMSON-210ENST00000641260 1308 ntBASIC6.33□□□□□ -1.4
NEK3P51956 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEK3P51956 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NEK3P51956 MIR16-2-201ENST00000362117 81 ntBASIC6.33□□□□□ -1.4
NEK3P51956 RNU6-666P-201ENST00000363499 107 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms