Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD4P46934 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD4P46934 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD4P46934 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 AC089998.1-201ENST00000548575 3141 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD4P46934 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NEDD4P46934 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD4P46934 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
NEDD4P46934 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD4P46934 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD4P46934 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NEDD4P46934 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD4P46934 RNU4-2-201ENST00000365668 141 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD4P46934 MIR551A-201ENST00000385042 96 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 AC092642.1-201ENST00000392417 425 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 RNU6-233P-201ENST00000410845 141 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 RIMKLBP2-201ENST00000424737 654 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 PRUNEP1-201ENST00000425846 705 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 H3F3BP2-201ENST00000583907 357 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD4P46934 AC010245.2-201ENST00000606908 1167 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 AC079395.2-201ENST00000610982 737 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD4P46934 AC005618.4-201ENST00000625053 554 ntBASIC6.49□□□□□ -1.37
NEDD4P46934 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD4P46934 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC239868.2-201ENST00000564237 4527 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 OFD1P17-201ENST00000437639 3018 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 MIR133B-201ENST00000362210 119 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 OR3A2-201ENST00000408891 1076 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD4P46934 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 RPS26P39-201ENST00000469206 341 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 EIF1P7-201ENST00000487533 337 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC078878.1-201ENST00000539832 958 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD4P46934 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD4P46934 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD4P46934 MIR6768-201ENST00000610734 72 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 AL031658.2-201ENST00000616850 651 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 RNA5SP439-201ENST00000617595 124 ntBASIC6.48□□□□□ -1.37
NEDD4P46934 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NEDD4P46934 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NEDD4P46934 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD4P46934 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD4P46934 AC027279.1-201ENST00000568885 4284 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NEDD4P46934 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD4P46934 SAMM50P1-201ENST00000455403 1399 ntBASIC6.47□□□□□ -1.37
NEDD4P46934 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD4P46934 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.47□□□□□ -1.37
NEDD4P46934 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.47□□□□□ -1.37
NEDD4P46934 RNA5SP319-201ENST00000362768 119 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms