Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AC113608.1-201ENST00000398740 305 ntBASIC7.9□□□□□ -1.14
RFX1P22670 EEF1GP6-201ENST00000402309 905 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AL512430.2-201ENST00000406786 339 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.9□□□□□ -1.14
RFX1P22670 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 AK4P4-201ENST00000419465 646 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 AL034418.1-201ENST00000448675 860 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RPL36AP33-201ENST00000450395 310 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC009244.1-201ENST00000450566 258 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.9□□□□□ -1.14
RFX1P22670 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 TRBV8-2-201ENST00000475637 270 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC072039.1-201ENST00000477611 581 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RPL9P33-201ENST00000484311 566 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RPS7P6-201ENST00000485777 579 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC104685.1-201ENST00000502445 371 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AC092349.1-201ENST00000504903 310 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC112225.1-201ENST00000508230 297 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RN7SKP31-201ENST00000516354 278 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RNU6-405P-201ENST00000516637 110 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC120036.3-201ENST00000517826 292 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.9□□□□□ -1.14
RFX1P22670 DUXAP2-201ENST00000519198 589 ntBASIC7.9□□□□□ -1.14
RFX1P22670 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
RFX1P22670 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.9□□□□□ -1.14
RFX1P22670 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.9□□□□□ -1.14
RFX1P22670 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 AC245505.1-201ENST00000556398 224 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AC005070.2-201ENST00000604391 260 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.9□□□□□ -1.14
RFX1P22670 AC012510.1-201ENST00000607946 759 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC012360.2-201ENST00000609349 391 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC138749.5-201ENST00000611461 208 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC026951.2-201ENST00000613847 241 ntBASIC7.9□□□□□ -1.14
RFX1P22670 HTR1DP1-201ENST00000616500 888 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.9□□□□□ -1.14
RFX1P22670 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
RFX1P22670 AC130448.2-201ENST00000624082 374 ntBASIC7.9□□□□□ -1.14
RFX1P22670 AL596275.2-203ENST00000641951 371 ntBASIC7.9□□□□□ -1.14
RFX1P22670 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RFX1P22670 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.9□□□□□ -1.14
RFX1P22670 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.9□□□□□ -1.14
RFX1P22670 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
RFX1P22670 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
RFX1P22670 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RFX1P22670 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
RFX1P22670 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.9□□□□□ -1.15
RFX1P22670 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 KARSP2-201ENST00000415696 1639 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.89□□□□□ -1.15
RFX1P22670 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RFX1P22670 MIR217-201ENST00000384817 110 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC090114.1-201ENST00000393266 448 ntBASIC7.89□□□□□ -1.15
RFX1P22670 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 AC136624.1-201ENST00000400791 413 ntBASIC7.89□□□□□ -1.15
RFX1P22670 SUMO2P13-201ENST00000403109 272 ntBASIC7.89□□□□□ -1.15
RFX1P22670 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.89□□□□□ -1.15
RFX1P22670 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 MTCYBP38-201ENST00000417160 1123 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC231533.2-201ENST00000419045 978 ntBASIC7.89□□□□□ -1.15
RFX1P22670 CYCSP46-201ENST00000423569 204 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 FDPSP1-201ENST00000424976 1071 ntBASIC7.89□□□□□ -1.15
RFX1P22670 PRUNEP1-201ENST00000425846 705 ntBASIC7.89□□□□□ -1.15
RFX1P22670 Z93242.1-201ENST00000427102 353 ntBASIC7.89□□□□□ -1.15
RFX1P22670 RPL21P110-201ENST00000433345 446 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AC241584.1-201ENST00000438469 1241 ntBASIC7.89□□□□□ -1.15
RFX1P22670 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 USP9YP29-201ENST00000445112 563 ntBASIC7.89□□□□□ -1.15
RFX1P22670 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.89□□□□□ -1.15
RFX1P22670 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.89□□□□□ -1.15
RFX1P22670 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RFX1P22670 RPSAP24-201ENST00000461543 873 ntBASIC7.89□□□□□ -1.15
RFX1P22670 RN7SL251P-201ENST00000464175 297 ntBASIC7.89□□□□□ -1.15
RFX1P22670 RPS4XP17-201ENST00000479057 754 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms