Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.1□□□□□ -1.43
VTNP04004 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.1□□□□□ -1.43
VTNP04004 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.1□□□□□ -1.43
VTNP04004 AC137627.1-201ENST00000545761 289 ntBASIC6.1□□□□□ -1.43
VTNP04004 AC126177.5-201ENST00000549599 178 ntBASIC6.1□□□□□ -1.43
VTNP04004 BLZF2P-201ENST00000553776 1130 ntBASIC6.1□□□□□ -1.43
VTNP04004 AC004825.1-201ENST00000555068 586 ntBASIC6.1□□□□□ -1.43
VTNP04004 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.1□□□□□ -1.43
VTNP04004 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 AC211433.2-201ENST00000608433 387 ntBASIC6.1□□□□□ -1.43
VTNP04004 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.1□□□□□ -1.43
VTNP04004 U1.25-201ENST00000614085 162 ntBASIC6.1□□□□□ -1.43
VTNP04004 U1.34-201ENST00000618578 162 ntBASIC6.1□□□□□ -1.43
VTNP04004 U1.31-201ENST00000620022 160 ntBASIC6.1□□□□□ -1.43
VTNP04004 AC018445.2-201ENST00000622987 260 ntBASIC6.1□□□□□ -1.43
VTNP04004 SAMMSON-209ENST00000641222 1100 ntBASIC6.1□□□□□ -1.43
VTNP04004 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VTNP04004 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VTNP04004 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VTNP04004 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
VTNP04004 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
VTNP04004 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VTNP04004 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VTNP04004 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VTNP04004 MAPK10-261ENST00000641050 3109 ntBASIC6.1□□□□□ -1.43
VTNP04004 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
VTNP04004 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.09□□□□□ -1.43
VTNP04004 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
VTNP04004 DNM1P47-203ENST00000571780 12667 ntBASIC6.09□□□□□ -1.43
VTNP04004 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
VTNP04004 SNX18P3-202ENST00000565670 1750 ntBASIC6.09□□□□□ -1.43
VTNP04004 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VTNP04004 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VTNP04004 RNA5SP183-201ENST00000362452 119 ntBASIC6.09□□□□□ -1.43
VTNP04004 GNG5P2-201ENST00000372054 207 ntBASIC6.09□□□□□ -1.43
VTNP04004 AL451142.1-201ENST00000375867 775 ntBASIC6.09□□□□□ -1.43
VTNP04004 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.09□□□□□ -1.43
VTNP04004 MIR105-2-201ENST00000385083 81 ntBASIC6.09□□□□□ -1.43
VTNP04004 AL121977.1-201ENST00000401636 979 ntBASIC6.09□□□□□ -1.43
VTNP04004 SPTLC1P2-201ENST00000407089 121 ntBASIC6.09□□□□□ -1.43
VTNP04004 AL133325.1-201ENST00000421090 382 ntBASIC6.09□□□□□ -1.43
VTNP04004 NANOGP9-201ENST00000439890 892 ntBASIC6.09□□□□□ -1.43
VTNP04004 AL596266.1-201ENST00000448132 400 ntBASIC6.09□□□□□ -1.43
VTNP04004 RPL7P39-201ENST00000481157 744 ntBASIC6.09□□□□□ -1.43
VTNP04004 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.09□□□□□ -1.43
VTNP04004 AC006499.3-201ENST00000506077 748 ntBASIC6.09□□□□□ -1.43
VTNP04004 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VTNP04004 OR5M14P-201ENST00000506803 618 ntBASIC6.09□□□□□ -1.43
VTNP04004 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.09□□□□□ -1.43
VTNP04004 CDC42P3-201ENST00000518493 633 ntBASIC6.09□□□□□ -1.43
VTNP04004 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.09□□□□□ -1.43
VTNP04004 PMS2P3-207ENST00000529061 717 ntBASIC6.09□□□□□ -1.43
VTNP04004 SETP3-201ENST00000581726 813 ntBASIC6.09□□□□□ -1.43
VTNP04004 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
VTNP04004 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.09□□□□□ -1.43
VTNP04004 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.09□□□□□ -1.43
VTNP04004 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VTNP04004 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VTNP04004 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VTNP04004 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTNP04004 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTNP04004 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VTNP04004 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTNP04004 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTNP04004 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
VTNP04004 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VTNP04004 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.08□□□□□ -1.44
VTNP04004 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.08□□□□□ -1.44
VTNP04004 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VTNP04004 MIR133B-201ENST00000362210 119 ntBASIC6.08□□□□□ -1.44
VTNP04004 RNU1-19P-201ENST00000363306 165 ntBASIC6.08□□□□□ -1.44
VTNP04004 RPSAP35-201ENST00000413753 818 ntBASIC6.08□□□□□ -1.44
VTNP04004 AC007161.1-204ENST00000423039 460 ntBASIC6.08□□□□□ -1.44
VTNP04004 CNOT7P2-201ENST00000441051 832 ntBASIC6.08□□□□□ -1.44
VTNP04004 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.08□□□□□ -1.44
VTNP04004 RN7SL172P-201ENST00000460535 303 ntBASIC6.08□□□□□ -1.44
VTNP04004 AC005532.2-201ENST00000467154 373 ntBASIC6.08□□□□□ -1.44
VTNP04004 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.08□□□□□ -1.44
VTNP04004 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.08□□□□□ -1.44
VTNP04004 RN7SKP253-201ENST00000516424 309 ntBASIC6.08□□□□□ -1.44
VTNP04004 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
VTNP04004 AL049779.2-201ENST00000553847 315 ntBASIC6.08□□□□□ -1.44
VTNP04004 RBM22P1-201ENST00000578589 1214 ntBASIC6.08□□□□□ -1.44
VTNP04004 AP005403.1-201ENST00000579720 229 ntBASIC6.08□□□□□ -1.44
VTNP04004 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VTNP04004 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms