Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL031681.1-201ENST00000443304 400 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.58□□□□□ -1.52
SHOX2O60902 BTG4P1-201ENST00000510421 183 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.58□□□□□ -1.52
SHOX2O60902 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.58□□□□□ -1.52
SHOX2O60902 CYCSP25-201ENST00000525280 316 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.58□□□□□ -1.52
SHOX2O60902 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 RPSAP75-201ENST00000605848 301 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 AL139407.1-201ENST00000613826 1175 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 AL122023.1-201ENST00000622847 530 ntBASIC5.58□□□□□ -1.52
SHOX2O60902 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.58□□□□□ -1.52
SHOX2O60902 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHOX2O60902 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHOX2O60902 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.58□□□□□ -1.52
SHOX2O60902 AC083843.3-201ENST00000623679 2186 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.57□□□□□ -1.52
SHOX2O60902 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
SHOX2O60902 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SHOX2O60902 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHOX2O60902 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHOX2O60902 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 SNORD94-201ENST00000386037 137 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 RPL35AP3-201ENST00000414680 288 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AC007679.3-201ENST00000434035 414 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AC046176.1-201ENST00000435260 1170 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 TRIM60P16-201ENST00000444048 694 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.57□□□□□ -1.52
SHOX2O60902 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.57□□□□□ -1.52
SHOX2O60902 AP003385.3-201ENST00000472498 287 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.57□□□□□ -1.52
SHOX2O60902 NIFKP7-201ENST00000503365 834 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.57□□□□□ -1.52
SHOX2O60902 BNIP3P1-201ENST00000547295 580 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.57□□□□□ -1.52
SHOX2O60902 AC022884.2-201ENST00000578535 580 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.57□□□□□ -1.52
SHOX2O60902 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.57□□□□□ -1.52
SHOX2O60902 SMIM12P1-201ENST00000603004 274 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.57□□□□□ -1.52
SHOX2O60902 AC012368.3-201ENST00000604190 219 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AL049840.6-201ENST00000604583 345 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 AL139099.4-201ENST00000614802 114 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.57□□□□□ -1.52
SHOX2O60902 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.57□□□□□ -1.52
SHOX2O60902 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.57□□□□□ -1.52
SHOX2O60902 AC217777.1-201ENST00000570034 1471 ntBASIC5.57□□□□□ -1.52
SHOX2O60902 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
SHOX2O60902 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHOX2O60902 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHOX2O60902 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 SELENOWP1-201ENST00000322792 252 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 SNORA21-201ENST00000362423 132 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 SNORA64.3-201ENST00000365647 134 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
SHOX2O60902 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.56□□□□□ -1.52
SHOX2O60902 RNA5SP487-201ENST00000410186 122 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 RN7SKP146-201ENST00000410242 334 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 MRPL53P1-201ENST00000414323 319 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 PCNPP4-201ENST00000414817 517 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.56□□□□□ -1.52
SHOX2O60902 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
SHOX2O60902 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.56□□□□□ -1.52
SHOX2O60902 ARMC4P1-201ENST00000438905 707 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 WDR82P2-201ENST00000444540 928 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.56□□□□□ -1.52
SHOX2O60902 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 RN7SL502P-201ENST00000481857 290 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.56□□□□□ -1.52
SHOX2O60902 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.56□□□□□ -1.52
SHOX2O60902 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.56□□□□□ -1.52
SHOX2O60902 TDGP1-201ENST00000543961 1229 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.56□□□□□ -1.52
SHOX2O60902 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.56□□□□□ -1.52
SHOX2O60902 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.56□□□□□ -1.52
SHOX2O60902 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.56□□□□□ -1.52
SHOX2O60902 MIR6885-201ENST00000612241 66 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 GAPDHP41-201ENST00000613707 975 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 RFPL4AP6-201ENST00000616792 846 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 BX005214.3-202ENST00000619809 325 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 MIR6811-201ENST00000620409 58 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms