Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL731532.1-201ENST00000623972 4236 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 AC034229.2-201ENST00000566945 2508 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 OR7E101P-201ENST00000400428 513 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AL353692.2-201ENST00000407054 335 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AC245060.4-201ENST00000413293 1121 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ZIC3O60481 MRPL53P1-201ENST00000414323 319 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC126120.1-201ENST00000431082 470 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AL365220.1-201ENST00000432923 399 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AL606490.7-201ENST00000433136 191 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC023141.8-201ENST00000442554 208 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC015864.1-201ENST00000496512 544 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 MTCO2P9-201ENST00000503214 694 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC016550.3-201ENST00000515706 767 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 SNORD46.2-201ENST00000516021 102 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.31□□□□□ -1.56
ZIC3O60481 IGLV3-30-201ENST00000524362 298 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.31□□□□□ -1.56
ZIC3O60481 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC233266.2-201ENST00000567067 528 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AC104072.1-201ENST00000568817 668 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.31□□□□□ -1.56
ZIC3O60481 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 FAM27E4-201ENST00000605259 342 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC104763.3-201ENST00000613765 618 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC009269.6-201ENST00000621778 588 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AL138955.1-201ENST00000622881 1040 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AP000943.4-201ENST00000622912 357 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 AC090772.4-201ENST00000623599 362 ntBASIC5.31□□□□□ -1.56
ZIC3O60481 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ZIC3O60481 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.31□□□□□ -1.56
ZIC3O60481 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZIC3O60481 AC022164.1-201ENST00000568767 2673 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ZIC3O60481 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.3□□□□□ -1.56
ZIC3O60481 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.3□□□□□ -1.56
ZIC3O60481 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
ZIC3O60481 AC093909.5-201ENST00000621839 1799 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.3□□□□□ -1.56
ZIC3O60481 AC017002.4-201ENST00000604721 1525 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 OR4K17-201ENST00000315543 1032 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ZIC3O60481 RNU6-650P-201ENST00000365658 111 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.3□□□□□ -1.56
ZIC3O60481 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.3□□□□□ -1.56
ZIC3O60481 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.3□□□□□ -1.56
ZIC3O60481 RPL23AP17-201ENST00000401064 499 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 NPM1P38-201ENST00000403835 865 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.3□□□□□ -1.56
ZIC3O60481 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.3□□□□□ -1.56
ZIC3O60481 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.3□□□□□ -1.56
ZIC3O60481 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.3□□□□□ -1.56
ZIC3O60481 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ZIC3O60481 RPS29P14-201ENST00000431518 171 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 DEFA9P-201ENST00000433042 285 ntBASIC5.3□□□□□ -1.56
ZIC3O60481 RPL23AP19-201ENST00000436229 369 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms