Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 MED6-212ENST00000615788 1700 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA3O43365 AL031651.1-201ENST00000615357 1438 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 RNA5SP172-201ENST00000365061 118 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 OR5H15-201ENST00000383696 930 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 RNU6-244P-201ENST00000391028 104 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 AL031577.2-201ENST00000404133 280 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 VTA1P1-201ENST00000414044 866 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 CDC42P6-201ENST00000421246 576 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC006366.1-201ENST00000422002 759 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 CNOT7P1-201ENST00000429006 852 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 GAPDHP19-201ENST00000431768 1005 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 RPSAP40-201ENST00000442343 891 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 RPL7AP71-201ENST00000451120 739 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA3O43365 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 RN7SL83P-201ENST00000468131 297 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 RN7SL216P-201ENST00000471607 298 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 RPS3AP49-201ENST00000472161 790 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC091959.2-201ENST00000477363 321 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 RN7SL654P-201ENST00000479178 292 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC069304.1-201ENST00000491593 704 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA3O43365 OR5H7P-201ENST00000514084 930 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC060788.1-201ENST00000521318 469 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AP000662.1-201ENST00000530952 487 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 UBE2NP1-201ENST00000545592 458 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC006530.1-201ENST00000555980 571 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC044913.1-201ENST00000557200 430 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC079171.1-201ENST00000568788 914 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 MIR3135A-201ENST00000578460 77 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 ZNF415P1-201ENST00000582279 1166 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 RSL24D1P11-201ENST00000591045 491 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 RPL7AP69-201ENST00000595306 806 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC068790.7-201ENST00000602347 528 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 AC004223.4-201ENST00000612426 332 ntBASIC5.56□□□□□ -1.52
HOXA3O43365 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
HOXA3O43365 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXA3O43365 AC011471.4-201ENST00000638271 216 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms