Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXN3O00409 FAM27E2-201ENST00000619668 403 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AL049777.1-201ENST00000622740 518 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC022919.1-201ENST00000624979 626 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 RBPJP7-201ENST00000442803 1447 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 RBPJP5-201ENST00000449433 1447 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC007159.1-201ENST00000566529 4706 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 AC008627.1-201ENST00000517511 1704 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 AC015689.2-201ENST00000528172 1738 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 GNL2P1-201ENST00000451274 2190 ntBASIC6.38□□□□□ -1.39
FOXN3O00409 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXN3O00409 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
FOXN3O00409 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXN3O00409 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 AC090181.3-201ENST00000624777 1514 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 SNORA51.9-201ENST00000384295 124 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC234781.4-201ENST00000419384 244 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 NENFP1-201ENST00000419476 466 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC099677.3-201ENST00000427081 395 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 RPL12P16-201ENST00000431098 498 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 AC073410.1-201ENST00000435125 589 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 SNRPFP2-201ENST00000440710 251 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 MTCYBP21-201ENST00000443300 1113 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AL353898.1-201ENST00000444055 238 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 TIMM8BP2-201ENST00000445940 251 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AL445466.1-201ENST00000448432 357 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 OSTCP1-201ENST00000455507 450 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 PFN1P6-201ENST00000476786 399 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 RPL38P3-201ENST00000484463 213 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 RPL9P15-201ENST00000491096 532 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC008629.2-201ENST00000503783 483 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC021146.7-201ENST00000509604 775 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXN3O00409 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC008126.1-201ENST00000549019 480 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 AC007346.2-201ENST00000564816 892 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC002519.2-203ENST00000567043 837 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 MIR4502-201ENST00000580432 81 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.37□□□□□ -1.39
FOXN3O00409 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXN3O00409 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXN3O00409 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 AC068870.3-201ENST00000625077 2536 ntBASIC6.37□□□□□ -1.39
FOXN3O00409 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
FOXN3O00409 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXN3O00409 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms