Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AC138832.1-201ENST00000522871 556 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 NMNAT1P5-201ENST00000559657 841 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 AL162456.1-201ENST00000634535 2006 ntBASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM49D1C9J1S8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC112198.2-201ENST00000426589 6996 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 OR9K1P-202ENST00000641111 3217 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 OR1L6-202ENST00000373684 1044 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AL022331.1-201ENST00000429025 477 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 RPL19P16-201ENST00000433839 588 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 MRE11P1-201ENST00000464884 2127 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 NENFP3-201ENST00000503735 313 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC098976.1-201ENST00000513014 541 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 OR5H7P-201ENST00000514084 930 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC024405.1-201ENST00000532521 1042 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 OR8G3P-201ENST00000533406 921 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AL845552.1-201ENST00000556820 323 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 MIR3154-201ENST00000577829 84 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AP000769.2-201ENST00000602344 396 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
TRIM49D1C9J1S8 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 MIR1203-201ENST00000408812 85 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 RPL24P2-201ENST00000421023 475 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC007679.3-201ENST00000434035 414 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AMYP1-201ENST00000440059 1023 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC016772.1-201ENST00000444170 1261 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 OR52E7P-201ENST00000452394 933 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 LSM3P4-201ENST00000502948 309 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 OR11H3P-201ENST00000554547 982 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 DPPA2P4-201ENST00000563717 878 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC093524.1-201ENST00000564266 1094 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AP005403.1-201ENST00000579720 229 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AL049840.6-201ENST00000604583 345 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC091932.2-201ENST00000623014 291 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 AC135068.5-201ENST00000624197 983 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 CASC19-274ENST00000642018 970 ntBASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 ADAM5-202ENST00000399789 1942 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms