Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 CBWD4P-201ENST00000445695 655 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC132479.1-201ENST00000449160 144 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 OR5S1P-201ENST00000453063 951 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 RPL18AP17-201ENST00000455326 198 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC099563.1-201ENST00000456086 418 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC110749.1-201ENST00000462007 357 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 RPL19P13-201ENST00000483119 583 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 RN7SL630P-201ENST00000483714 297 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 RN7SL388P-201ENST00000498736 339 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 NPY6R-201ENST00000503807 1112 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AF186996.3-201ENST00000509527 964 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC091839.1-201ENST00000513087 269 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 RNU7-30P-201ENST00000516835 62 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 COX4I1P1-201ENST00000554239 509 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AL137000.1-201ENST00000610528 1244 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.29□□□□□ -1.08
RCCD1A6NED2 AC090771.1-201ENST00000585803 1618 ntBASIC8.29□□□□□ -1.08
RCCD1A6NED2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RCCD1A6NED2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RCCD1A6NED2 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RCCD1A6NED2 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RCCD1A6NED2 RNA5SP78-201ENST00000364622 118 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RCCD1A6NED2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RCCD1A6NED2 MT-TR-201ENST00000387439 65 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 RNA5SP23-201ENST00000391006 105 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 OR51A3P-201ENST00000413596 924 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 RPL7AP72-201ENST00000417266 768 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC092042.2-201ENST00000417304 331 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC126124.1-201ENST00000426104 185 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 NANOGP6-201ENST00000429190 847 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC109583.1-201ENST00000432156 268 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 ANKRD54P1-201ENST00000433115 471 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 RPL7P29-201ENST00000437151 728 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 RPSAP40-201ENST00000442343 891 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 HMGN1P36-201ENST00000446623 298 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC093799.1-201ENST00000452411 499 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AL591438.2-201ENST00000452635 691 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 GAPDHP28-201ENST00000455134 1003 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC135999.1-201ENST00000478962 479 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RCCD1A6NED2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC103851.1-201ENST00000506833 274 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC093809.1-201ENST00000509155 340 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 RNU6-1004P-201ENST00000516584 111 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC016954.1-201ENST00000549976 745 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC233290.2-201ENST00000552852 390 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 RN7SL237P-201ENST00000580912 287 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 MIR4314-201ENST00000583321 92 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC006557.4-201ENST00000585516 830 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 AC016629.2-201ENST00000597341 199 ntBASIC8.28□□□□□ -1.08
RCCD1A6NED2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.28□□□□□ -1.08
RCCD1A6NED2 PRR13P3-201ENST00000603578 376 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms