Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 RPS2P45-201ENST00000469997 2057 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AL353796.1-201ENST00000561542 3241 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 OR52B3P-201ENST00000314715 928 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC113412.1-201ENST00000425840 504 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 VTI1BP4-201ENST00000427516 527 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC092106.1-201ENST00000444291 373 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC019084.1-201ENST00000457337 432 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC011476.1-201ENST00000466725 307 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 HMGN1P9-201ENST00000515212 298 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 RNA5SP271-201ENST00000516700 88 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SCARNA20.4-201ENST00000516969 131 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 OR8G3P-201ENST00000533406 921 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AL138895.2-201ENST00000603019 178 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 uc_338.7-201ENST00000621834 124 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AL078621.3-201ENST00000623707 2042 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC106872.5-201ENST00000508856 1416 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC114786.1-201ENST00000512892 1415 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 AL034549.2-201ENST00000618285 3373 ntBASIC4.95□□□□□ -1.62
TRAV27A0A087WT01 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 RN7SKP187-201ENST00000365536 330 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 RPS3AP2-201ENST00000407190 754 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 HYALP1-201ENST00000417674 1279 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 OR6D1P-201ENST00000436165 939 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 DNAJA1P5-201ENST00000440278 943 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC005297.1-201ENST00000444765 862 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC130364.2-201ENST00000528639 604 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AP004609.2-201ENST00000532177 190 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 OR11H3P-201ENST00000554547 982 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 MRPS21P7-201ENST00000566937 238 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 RN7SL290P-201ENST00000578661 300 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC018628.1-201ENST00000624147 3819 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC135068.5-201ENST00000624197 983 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 AC008691.1-209ENST00000642094 814 ntBASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TRAV27A0A087WT01 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms