Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 OR2AT2P-201ENST00000413438 905 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 BMS1P17-202ENST00000416720 316 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 RPS4XP5-201ENST00000419038 768 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 HMGB3P24-201ENST00000433260 622 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 EEF1B2P6-201ENST00000445713 673 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 SDC4P-201ENST00000453285 601 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 RAB28P2-201ENST00000454299 641 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 RN7SL352P-201ENST00000466002 277 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC012123.2-201ENST00000485809 248 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC090058.1-201ENST00000498788 435 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 CYP4F27P-201ENST00000514557 494 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AP001357.1-201ENST00000586304 1053 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC000095.2-202ENST00000637415 154 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC027279.1-201ENST00000568885 4284 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AC140134.1-201ENST00000511830 3544 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 AL049634.1-201ENST00000453770 1720 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 Z83820.1-201ENST00000456978 1499 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC016583.1-201ENST00000624221 2431 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC027279.4-201ENST00000624371 2072 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 RANP7-201ENST00000418085 644 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC013410.1-201ENST00000436223 1232 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC009963.4-201ENST00000448535 339 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 DUTP7-201ENST00000507982 486 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 IGKV2-18-201ENST00000522607 343 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 GTF2IP11-201ENST00000526931 420 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC027026.1-201ENST00000532323 742 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AL354696.1-201ENST00000614652 497 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AL445670.1-201ENST00000618889 801 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC104820.1-201ENST00000624183 307 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 OR11H2-202ENST00000641517 1085 ntBASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC6Q9UBN7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 AL136116.2-201ENST00000404020 785 ntBASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 DPPA2P2-201ENST00000418220 897 ntBASIC6.54□□□□□ -1.36
HDAC6Q9UBN7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms