Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RN7SKP299-201ENST00000606679 301 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL135999.3-201ENST00000610501 812 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL160394.1-201ENST00000624765 724 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 MTND5P29-201ENST00000458676 1807 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC005702.3-201ENST00000585345 1447 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RAD17P2-201ENST00000451754 1977 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 MAPK10-383ENST00000642032 3390 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LPAL2-203ENST00000454031 2498 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 RN7SKP69-201ENST00000365390 305 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 Y_RNA.472-201ENST00000384322 102 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 TAF9BP2-201ENST00000400856 499 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 ATF1P1-201ENST00000406040 927 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 RN7SKP296-201ENST00000411185 341 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 SETP15-201ENST00000412724 337 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 MTND4P3-201ENST00000417829 541 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 MTATP6P13-201ENST00000438531 667 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 ISCA1P2-201ENST00000438679 421 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC245517.2-201ENST00000442890 346 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC018645.1-201ENST00000505003 109 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 MTCYBP41-201ENST00000528913 1123 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AL512310.9-201ENST00000553311 948 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC002310.3-201ENST00000569728 723 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AP003115.1-201ENST00000569849 463 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 MTND3P19-201ENST00000603825 345 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 FO082842.1-201ENST00000423552 1370 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AC074141.1-201ENST00000588129 2995 ntBASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SYNGAP1Q96PV0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-517P-201ENST00000384362 110 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-1320P-201ENST00000390838 107 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-1269P-201ENST00000391139 107 ntBASIC7.52□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms