Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 SS18L2P1-201ENST00000445923 213 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC093799.1-201ENST00000452411 499 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 ST13P21-201ENST00000453250 1098 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC005550.2-201ENST00000476382 318 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 RN7SL267P-201ENST00000485107 261 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 RN7SKP13-201ENST00000515933 244 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 IGKV2-29-201ENST00000521304 372 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AP000889.1-201ENST00000530968 660 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 BMS1P15-201ENST00000554269 1141 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC004817.2-201ENST00000561794 651 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AC012065.4-201ENST00000602445 679 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AL021368.3-201ENST00000607119 578 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AL136295.6-201ENST00000610486 658 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MIR1302-1-201ENST00000637932 143 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MFSD8-245ENST00000641743 948 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 SAMM50P1-201ENST00000455403 1399 ntBASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
NPAS3Q8IXF0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 HDAC1P1-201ENST00000455482 1445 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 MTND5P33-201ENST00000571250 1450 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AL157777.2-201ENST00000258070 137 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 SNORA51.2-201ENST00000364595 132 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RAB28P1-201ENST00000411517 641 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AL773545.3-201ENST00000414297 706 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AL589794.1-201ENST00000424971 390 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 SDAD1P3-201ENST00000427380 333 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 FUNDC2P2-202ENST00000443452 493 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 ARL2BPP10-201ENST00000446487 531 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 PPIAP32-201ENST00000449940 472 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RPL7L1P3-201ENST00000455249 689 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 YRDCP3-201ENST00000456507 480 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RN7SL259P-201ENST00000478499 253 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RPS29P25-201ENST00000481709 171 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 LARP1BP2-201ENST00000486594 519 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC105914.1-201ENST00000511798 226 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RN7SKP116-201ENST00000516902 319 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 GTF2IP22-201ENST00000554443 182 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC107954.1-201ENST00000565906 727 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 RN7SL32P-201ENST00000580514 281 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 IGLJCOR18-201ENST00000584002 424 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC007687.1-201ENST00000602704 304 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AL121936.2-201ENST00000641935 662 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 AC099063.3-201ENST00000642066 185 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms