Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPL26P37-201ENST00000411983 438 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 RPL7P44-201ENST00000424827 742 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MTCO1P20-201ENST00000425366 358 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MTCO2P12-201ENST00000427426 682 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 RPSAP62-201ENST00000432596 833 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC242426.1-201ENST00000435270 960 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 RPS25P9-201ENST00000435591 252 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 OR7E62P-201ENST00000456741 477 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC108078.1-201ENST00000508073 725 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 FGF7P4-201ENST00000509595 295 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MTCYBP43-201ENST00000513621 740 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 HIGD1AP9-201ENST00000550710 279 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 UBE2CP1-201ENST00000557130 554 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC007151.1-201ENST00000572774 483 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 BNIP3P22-201ENST00000593399 556 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 PRR13P3-201ENST00000603578 376 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC007262.1-201ENST00000604099 321 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 COX6CP4-201ENST00000605798 228 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 AC087045.3-201ENST00000623046 2468 ntBASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.56□□□□□ -1.2
LYSMD3Q7Z3D4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL034370.1-201ENST00000397254 1590 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 VN2R3P-201ENST00000422626 1412 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 Y_RNA.296-201ENST00000364930 108 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 MIR498-201ENST00000385134 124 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 RNU6-907P-201ENST00000390924 102 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 SNORA40.3-201ENST00000390964 122 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 CDC42P6-201ENST00000421246 576 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC019185.3-201ENST00000438805 323 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 RPL39P6-201ENST00000448289 150 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 CDC42P2-201ENST00000448566 569 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 USP9YP12-201ENST00000450481 570 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AL035407.2-201ENST00000454090 378 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 RPL34P22-201ENST00000468193 318 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC108120.1-201ENST00000506543 991 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC117383.2-201ENST00000514722 322 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 MTND1P35-201ENST00000526739 508 ntBASIC7.55□□□□□ -1.2
LYSMD3Q7Z3D4 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms