Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 RAB28P4-201ENST00000622233 665 ntBASIC5.32□□□□□ -1.56
C11orf88Q6PI97 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 AC090181.3-201ENST00000624777 1514 ntBASIC5.32□□□□□ -1.56
C11orf88Q6PI97 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.32□□□□□ -1.56
C11orf88Q6PI97 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 FANCD2P2-201ENST00000437591 1400 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC107977.1-201ENST00000355745 939 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 RNA5SP140-201ENST00000364524 92 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 RNU6-31P-201ENST00000384388 108 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 PSMA6P1-201ENST00000400275 741 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 MRPS21P5-201ENST00000417885 231 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 YY1P1-201ENST00000427625 668 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 MTCYBP12-201ENST00000440559 1134 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 COL11A2P1-205ENST00000441798 676 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC008410.1-201ENST00000483777 339 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 RPL3P13-201ENST00000550415 216 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 SYPL1P2-201ENST00000582878 727 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AP004372.1-201ENST00000604842 844 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC114477.1-201ENST00000605097 605 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AL589743.6-201ENST00000611025 117 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AL139407.1-201ENST00000613826 1175 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 AC119674.1-212ENST00000641155 993 ntBASIC5.31□□□□□ -1.56
C11orf88Q6PI97 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
C11orf88Q6PI97 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 PSMC1P4-201ENST00000515236 1327 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AC138907.8-201ENST00000623981 2256 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 RNA5SP485-201ENST00000365053 119 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 MIR433-201ENST00000384837 93 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 MTND3P20-201ENST00000407663 186 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 RANP6-201ENST00000413691 644 ntBASIC5.3□□□□□ -1.56
C11orf88Q6PI97 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
C11orf88Q6PI97 RPL7AP51-201ENST00000422016 760 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms