Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RPL7P32-201ENST00000457119 744 ntBASIC5.45□□□□□ -1.54
RIF1Q5UIP0 RN7SKP99-201ENST00000517028 307 ntBASIC5.45□□□□□ -1.54
RIF1Q5UIP0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.45□□□□□ -1.54
RIF1Q5UIP0 AC005000.1-201ENST00000536192 288 ntBASIC5.45□□□□□ -1.54
RIF1Q5UIP0 AP002373.2-201ENST00000541631 1060 ntBASIC5.45□□□□□ -1.54
RIF1Q5UIP0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.45□□□□□ -1.54
RIF1Q5UIP0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.45□□□□□ -1.54
RIF1Q5UIP0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 MAPK10-383ENST00000642032 3390 ntBASIC5.44□□□□□ -1.54
RIF1Q5UIP0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 AC091390.2-201ENST00000432573 374 ntBASIC5.44□□□□□ -1.54
RIF1Q5UIP0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 AL359073.1-201ENST00000448036 403 ntBASIC5.44□□□□□ -1.54
RIF1Q5UIP0 CCDC11P1-201ENST00000503137 1162 ntBASIC5.44□□□□□ -1.54
RIF1Q5UIP0 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 AC073575.2-201ENST00000614212 627 ntBASIC5.44□□□□□ -1.54
RIF1Q5UIP0 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.44□□□□□ -1.54
RIF1Q5UIP0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RIF1Q5UIP0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 RPL7P11-201ENST00000437586 658 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 CR383656.1-201ENST00000484916 377 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC134349.2-201ENST00000535136 910 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC092490.3-201ENST00000545370 572 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC025574.2-201ENST00000615621 514 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC091932.2-201ENST00000623014 291 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 INTS6P1-201ENST00000504674 2530 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 ZNF658B-201ENST00000602828 3408 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 RNU2-50P-201ENST00000410494 143 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 GTF2IP11-201ENST00000526931 420 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 MIR4429-201ENST00000580105 73 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC112694.2-201ENST00000623697 768 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 IRF5P1-201ENST00000504852 2164 ntBASIC5.43□□□□□ -1.54
RIF1Q5UIP0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RIF1Q5UIP0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 RPS27AP7-201ENST00000422792 455 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 NPM1P27-201ENST00000502784 830 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AP006289.1-201ENST00000538089 277 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AC233699.1-201ENST00000569955 1168 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AC137695.1-201ENST00000604126 489 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AL031320.1-201ENST00000604177 357 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 BIN2P1-201ENST00000504996 1530 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RIF1Q5UIP0 SNORA57.1-201ENST00000391227 145 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AC025750.1-201ENST00000399891 379 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AC007161.1-204ENST00000423039 460 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 AC092106.1-201ENST00000444291 373 ntBASIC5.42□□□□□ -1.54
RIF1Q5UIP0 RBMY2TP-201ENST00000451162 947 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 794.9 ms