Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
PCDH1Q08174 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDH1Q08174 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDH1Q08174 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH1Q08174 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
PCDH1Q08174 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH1Q08174 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
PCDH1Q08174 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH1Q08174 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
PCDH1Q08174 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH1Q08174 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.96□□□□□ -1.29
PCDH1Q08174 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.96□□□□□ -1.29
PCDH1Q08174 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.96□□□□□ -1.3
PCDH1Q08174 Y_RNA.11-201ENST00000362375 109 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH1Q08174 TYMSP1-201ENST00000407851 869 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH1Q08174 ATG4AP1-201ENST00000416893 538 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 RPL17P17-201ENST00000419491 557 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 MRPS36P1-201ENST00000421291 307 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 DNAJC19P1-201ENST00000455312 319 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AC016489.1-201ENST00000461109 375 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 RPL5P24-201ENST00000463742 885 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC021074.2-201ENST00000468434 172 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 RN7SL688P-201ENST00000471754 275 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH1Q08174 RN7SL282P-201ENST00000479676 297 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 RN7SL705P-201ENST00000481678 294 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDH1Q08174 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC068631.3-201ENST00000538831 225 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDH1Q08174 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PCDH1Q08174 OR11J2P-201ENST00000555298 907 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AC044860.3-201ENST00000559957 368 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC009063.1-201ENST00000563342 702 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 MIR5705-201ENST00000579870 89 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 MIR4258-201ENST00000580920 91 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AL137072.1-201ENST00000603444 466 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 IMMP1LP1-201ENST00000605170 488 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 AC004890.3-201ENST00000605566 1095 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC087893.2-201ENST00000623272 255 ntBASIC6.96□□□□□ -1.3
PCDH1Q08174 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH1Q08174 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
PCDH1Q08174 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH1Q08174 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH1Q08174 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
PCDH1Q08174 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH1Q08174 AC119674.1-213ENST00000641177 1386 ntBASIC6.95□□□□□ -1.3
PCDH1Q08174 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PCDH1Q08174 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH1Q08174 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH1Q08174 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH1Q08174 OR10J6P-201ENST00000289731 930 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms