Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 GCSHP4-201ENST00000538792 439 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AL121594.2-201ENST00000541658 472 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AC005341.1-201ENST00000571086 708 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.3□□□□□ -1.24
COL16A1Q07092 AP005403.1-201ENST00000579720 229 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AL391358.1-201ENST00000605342 190 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.3□□□□□ -1.24
COL16A1Q07092 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.3□□□□□ -1.24
COL16A1Q07092 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.3□□□□□ -1.24
COL16A1Q07092 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.3□□□□□ -1.24
COL16A1Q07092 AL078621.3-201ENST00000623707 2042 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
COL16A1Q07092 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
COL16A1Q07092 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.3□□□□□ -1.24
COL16A1Q07092 RNA5SP113-201ENST00000410486 84 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.3□□□□□ -1.24
COL16A1Q07092 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.3□□□□□ -1.24
COL16A1Q07092 OR11I1P-201ENST00000486033 954 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC7.3□□□□□ -1.24
COL16A1Q07092 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.3□□□□□ -1.24
COL16A1Q07092 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 BNIP3P5-201ENST00000562290 498 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 BGLT3-201ENST00000564523 994 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AC011497.2-201ENST00000600255 639 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AP001521.2-201ENST00000608772 546 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 AC091932.2-201ENST00000623014 291 ntBASIC7.3□□□□□ -1.24
COL16A1Q07092 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
COL16A1Q07092 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 COL6A4P1-202ENST00000487147 4317 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
COL16A1Q07092 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 AC006058.1-201ENST00000568686 5067 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 AL031123.3-201ENST00000623345 1837 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
COL16A1Q07092 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 RNA5SP326-201ENST00000363209 110 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 RNA5SP428-201ENST00000365129 132 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 AC007562.1-201ENST00000421819 517 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 AL359265.2-201ENST00000434367 631 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.29□□□□□ -1.24
COL16A1Q07092 AC023274.2-201ENST00000445264 521 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 AP000797.2-201ENST00000475768 606 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 AC140172.1-201ENST00000502928 141 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.29□□□□□ -1.24
COL16A1Q07092 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL16A1Q07092 BNIP3P33-201ENST00000598912 569 ntBASIC7.29□□□□□ -1.24
COL16A1Q07092 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
COL16A1Q07092 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL16A1Q07092 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.28□□□□□ -1.24
COL16A1Q07092 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.28□□□□□ -1.24
COL16A1Q07092 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 AC092747.4-201ENST00000620519 1861 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.28□□□□□ -1.24
COL16A1Q07092 MIR105-1-201ENST00000385222 81 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 RN7SKP151-201ENST00000410230 316 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL16A1Q07092 AC234779.1-201ENST00000425910 285 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 RBMY2TP-201ENST00000451162 947 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.28□□□□□ -1.24
COL16A1Q07092 AC009643.1-201ENST00000532030 391 ntBASIC7.28□□□□□ -1.24
COL16A1Q07092 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.28□□□□□ -1.24
COL16A1Q07092 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.28□□□□□ -1.24
COL16A1Q07092 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.28□□□□□ -1.24
COL16A1Q07092 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.28□□□□□ -1.24
COL16A1Q07092 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL16A1Q07092 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms