Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 AP000534.2-201ENST00000412729 568 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 SLC35E1P1-201ENST00000419313 864 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.53□□□□□ -1.36
GABPAQ06546 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.53□□□□□ -1.36
GABPAQ06546 AL606490.1-201ENST00000452266 765 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 OR2AO1P-201ENST00000476497 403 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 RPS21P4-201ENST00000487122 248 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.53□□□□□ -1.36
GABPAQ06546 AC006499.3-201ENST00000506077 748 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
GABPAQ06546 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.53□□□□□ -1.36
GABPAQ06546 BX323046.1-201ENST00000610145 535 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 AC008115.4-201ENST00000619780 775 ntBASIC6.53□□□□□ -1.36
GABPAQ06546 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.53□□□□□ -1.36
GABPAQ06546 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.53□□□□□ -1.36
GABPAQ06546 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
GABPAQ06546 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.53□□□□□ -1.36
GABPAQ06546 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
GABPAQ06546 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
GABPAQ06546 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GABPAQ06546 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.36
GABPAQ06546 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
GABPAQ06546 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.52□□□□□ -1.37
GABPAQ06546 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GABPAQ06546 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
GABPAQ06546 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GABPAQ06546 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
GABPAQ06546 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GABPAQ06546 MIR105-2-201ENST00000385083 81 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 RNA5SP339-201ENST00000390987 122 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
GABPAQ06546 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.52□□□□□ -1.37
GABPAQ06546 CYCSP6-201ENST00000434498 302 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 OR52B5P-201ENST00000435337 951 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.52□□□□□ -1.37
GABPAQ06546 AC105399.1-202ENST00000447303 205 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 AL035090.1-201ENST00000454835 332 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.52□□□□□ -1.37
GABPAQ06546 RN7SL30P-201ENST00000488416 306 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 RPS17P5-201ENST00000498293 408 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.52□□□□□ -1.37
GABPAQ06546 RN7SKP248-201ENST00000516278 305 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 RNA5SP92-201ENST00000516437 110 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 PMS2P3-207ENST00000529061 717 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.52□□□□□ -1.37
GABPAQ06546 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.52□□□□□ -1.37
GABPAQ06546 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.52□□□□□ -1.37
GABPAQ06546 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.52□□□□□ -1.37
GABPAQ06546 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.52□□□□□ -1.37
GABPAQ06546 OR52B5P-202ENST00000641118 1110 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
GABPAQ06546 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
GABPAQ06546 MT-RNR2-201ENST00000387347 1559 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 AC068870.1-201ENST00000563737 2455 ntBASIC6.52□□□□□ -1.37
GABPAQ06546 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
GABPAQ06546 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.51□□□□□ -1.37
GABPAQ06546 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 C4BPAP1-201ENST00000415474 1893 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
GABPAQ06546 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 AL121886.1-201ENST00000358609 435 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GABPAQ06546 RPL11P3-201ENST00000395256 523 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 SPTLC1P2-201ENST00000407089 121 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.51□□□□□ -1.37
GABPAQ06546 NANOGP4-201ENST00000427230 913 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 AC245047.2-201ENST00000441060 530 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 AC005532.2-201ENST00000467154 373 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 ATP5LP5-201ENST00000483050 299 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.51□□□□□ -1.37
GABPAQ06546 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.51□□□□□ -1.37
GABPAQ06546 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GABPAQ06546 AC018558.5-201ENST00000565840 952 ntBASIC6.51□□□□□ -1.37
GABPAQ06546 MIR4443-201ENST00000585052 53 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms