Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC093510.2-201ENST00000562820 896 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 SNX6P1-201ENST00000601728 1224 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC125494.2-201ENST00000602431 657 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC027334.1-201ENST00000603257 310 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC019131.2-201ENST00000609071 870 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 MIR6721-201ENST00000617181 87 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 RPL23AP61-201ENST00000623642 466 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC018717.1-201ENST00000457712 1505 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC090181.3-201ENST00000624777 1514 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL161912.4-201ENST00000623889 2468 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 RNFT1P3-201ENST00000340898 1052 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 U3.23-201ENST00000391132 200 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 RN7SKP108-201ENST00000411367 328 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL035422.1-201ENST00000414193 397 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 UBE2D3P3-201ENST00000426992 425 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL365220.1-201ENST00000432923 399 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AC093716.1-201ENST00000435923 377 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 PA2G4P6-201ENST00000438325 1197 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AL158053.1-201ENST00000441503 453 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.86□□□□□ -1.63
CX3CL1P78423 TIMM8BP2-201ENST00000445940 251 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 HMGB1P7-201ENST00000450921 612 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 RBMY2TP-201ENST00000451162 947 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AC069277.2-201ENST00000454211 432 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 RN7SL352P-201ENST00000466002 277 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AC092902.1-201ENST00000486999 259 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 SUMO1P1-201ENST00000497904 306 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 BTG4P1-201ENST00000510421 183 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 MAST4-IT1-201ENST00000514241 658 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 CYP4F27P-201ENST00000514557 494 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 NPM1P42-201ENST00000560329 862 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 MRPS21P8-201ENST00000569196 235 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL080312.2-201ENST00000613001 630 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 RN7SL261P-201ENST00000613441 282 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AC073488.6-201ENST00000632293 754 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 AL357140.4-201ENST00000636827 412 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 CAP1P2-201ENST00000417455 1409 ntBASIC4.86□□□□□ -1.63
CX3CL1P78423 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CX3CL1P78423 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.86□□□□□ -1.63
CX3CL1P78423 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
CX3CL1P78423 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms