Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RIPK4P57078 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 MT-RNR2-201ENST00000387347 1559 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RIPK4P57078 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.3□□□□□ -1.24
RIPK4P57078 RN7SKP6-201ENST00000364795 319 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 RNU4-2-201ENST00000365668 141 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 OR3A2-201ENST00000408891 1076 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.3□□□□□ -1.24
RIPK4P57078 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 RN7SL583P-201ENST00000475692 287 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RIPK4P57078 AC011411.1-201ENST00000509592 876 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RIPK4P57078 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 MTCO1P11-201ENST00000429111 1528 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.3□□□□□ -1.24
RIPK4P57078 AC089998.1-201ENST00000548575 3141 ntBASIC7.3□□□□□ -1.24
RIPK4P57078 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.29□□□□□ -1.24
RIPK4P57078 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 AC144833.1-201ENST00000567953 4089 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 RN7SKP160-201ENST00000363804 340 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 MIR551A-201ENST00000385042 96 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 RPSAP35-201ENST00000413753 818 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.29□□□□□ -1.24
RIPK4P57078 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.29□□□□□ -1.24
RIPK4P57078 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.29□□□□□ -1.24
RIPK4P57078 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.29□□□□□ -1.24
RIPK4P57078 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 RN7SL547P-201ENST00000490793 290 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 EIF3LP3-201ENST00000495197 822 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 RPS17P5-201ENST00000498293 408 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 AC090638.1-201ENST00000498296 909 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.29□□□□□ -1.24
RIPK4P57078 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.29□□□□□ -1.24
RIPK4P57078 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.29□□□□□ -1.24
RIPK4P57078 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.29□□□□□ -1.24
RIPK4P57078 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 AC022467.1-201ENST00000614738 749 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 CASC19-248ENST00000641674 1356 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 OR4F13P-202ENST00000560066 2054 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RIPK4P57078 AC138907.8-201ENST00000623981 2256 ntBASIC7.29□□□□□ -1.24
RIPK4P57078 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
RIPK4P57078 AC092451.3-201ENST00000625067 1343 ntBASIC7.28□□□□□ -1.24
RIPK4P57078 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.28□□□□□ -1.24
RIPK4P57078 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RIPK4P57078 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RIPK4P57078 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RIPK4P57078 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.28□□□□□ -1.24
RIPK4P57078 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.28□□□□□ -1.24
RIPK4P57078 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
RIPK4P57078 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RIPK4P57078 SNORA16A-201ENST00000384342 137 ntBASIC7.28□□□□□ -1.24
RIPK4P57078 RN7SKP229-201ENST00000410465 302 ntBASIC7.28□□□□□ -1.24
RIPK4P57078 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.28□□□□□ -1.24
RIPK4P57078 OR10T1P-201ENST00000424327 947 ntBASIC7.28□□□□□ -1.24
RIPK4P57078 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RIPK4P57078 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.28□□□□□ -1.24
RIPK4P57078 ATP5LP5-201ENST00000483050 299 ntBASIC7.28□□□□□ -1.24
RIPK4P57078 ATP5LP3-201ENST00000514223 304 ntBASIC7.28□□□□□ -1.24
RIPK4P57078 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.28□□□□□ -1.24
RIPK4P57078 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.28□□□□□ -1.24
RIPK4P57078 AC079395.2-201ENST00000610982 737 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms