Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RN7SKP28-201ENST00000364770 305 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLDN6P56747 MIR550A3-201ENST00000390735 95 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN6P56747 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN6P56747 RPS23P9-201ENST00000448848 438 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN6P56747 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.5□□□□□ -1.53
CLDN6P56747 RN7SL583P-201ENST00000475692 287 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 AC110775.1-201ENST00000513721 462 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 GTF2IP11-201ENST00000526931 420 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN6P56747 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN6P56747 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN6P56747 AC007494.1-201ENST00000562293 760 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 OR1F2P-201ENST00000570470 933 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN6P56747 ELOCP28-201ENST00000590044 317 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 AC133644.2-201ENST00000608142 540 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 CCAT2-201ENST00000630920 1752 ntBASIC5.5□□□□□ -1.53
CLDN6P56747 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CLDN6P56747 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN6P56747 AP004607.3-201ENST00000530354 3915 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
CLDN6P56747 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN6P56747 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 RNU1-106P-201ENST00000384382 164 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN6P56747 RN7SKP213-201ENST00000410746 298 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN6P56747 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN6P56747 MORF4L1P4-201ENST00000450245 976 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 AL450023.1-201ENST00000450868 751 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 AL035090.1-201ENST00000454835 332 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 SLC25A51P1-201ENST00000468432 871 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 RPL7P39-201ENST00000481157 744 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN6P56747 AC105420.1-201ENST00000504389 582 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.49□□□□□ -1.53
CLDN6P56747 AC096996.1-201ENST00000563813 325 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN6P56747 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN6P56747 AC100827.5-201ENST00000615883 426 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN6P56747 AC069542.2-201ENST00000624816 216 ntBASIC5.49□□□□□ -1.53
CLDN6P56747 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN6P56747 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN6P56747 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN6P56747 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 AC023421.1-201ENST00000590535 1785 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN6P56747 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN6P56747 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN6P56747 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN6P56747 RPL34P27-201ENST00000428810 349 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 OR52B5P-201ENST00000435337 951 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 H2AFZP6-201ENST00000444403 394 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 VDAC2P4-201ENST00000452925 711 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 RPL23AP40-201ENST00000487630 390 ntBASIC5.48□□□□□ -1.53
CLDN6P56747 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN6P56747 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN6P56747 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN6P56747 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN6P56747 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN6P56747 RNA5SP228-201ENST00000516232 133 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms