Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NR1H2P55055 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NR1H2P55055 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
NR1H2P55055 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.82□□□□□ -1.48
NR1H2P55055 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NR1H2P55055 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.82□□□□□ -1.48
NR1H2P55055 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.82□□□□□ -1.48
NR1H2P55055 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.82□□□□□ -1.48
NR1H2P55055 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 ZNF733P-202ENST00000444809 1573 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NR1H2P55055 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.81□□□□□ -1.48
NR1H2P55055 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 SNORD35A-201ENST00000363389 86 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 RNA5SP279-201ENST00000365513 117 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 RNU4-31P-201ENST00000384211 141 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AL590635.1-201ENST00000406314 586 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AL929472.1-201ENST00000417484 429 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 AL360013.1-201ENST00000419031 858 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 NDUFA5P10-201ENST00000432147 357 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC099670.2-201ENST00000435130 321 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.81□□□□□ -1.48
NR1H2P55055 RPL6P30-201ENST00000443382 862 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 LDHBP2-201ENST00000456969 1005 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 RPL12P24-201ENST00000474907 486 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC022415.1-202ENST00000486612 523 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.81□□□□□ -1.48
NR1H2P55055 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.81□□□□□ -1.48
NR1H2P55055 EIF4A2P5-201ENST00000529914 499 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC023158.1-201ENST00000561632 1025 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 MIR4675-201ENST00000577898 77 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.81□□□□□ -1.48
NR1H2P55055 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 AL158211.2-201ENST00000607282 395 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.81□□□□□ -1.48
NR1H2P55055 AL589743.6-201ENST00000611025 117 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 AC084824.5-201ENST00000612009 413 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 MIR1264-201ENST00000616374 69 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.81□□□□□ -1.48
NR1H2P55055 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 MFSD8-219ENST00000641228 2559 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.81□□□□□ -1.48
NR1H2P55055 RBPJP2-201ENST00000618187 1444 ntBASIC5.81□□□□□ -1.48
NR1H2P55055 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NR1H2P55055 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 ZNF90P1-201ENST00000480493 1951 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
NR1H2P55055 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.8□□□□□ -1.48
NR1H2P55055 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.8□□□□□ -1.48
NR1H2P55055 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
NR1H2P55055 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NR1H2P55055 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NR1H2P55055 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NR1H2P55055 RNA5SP485-201ENST00000365053 119 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.8□□□□□ -1.48
NR1H2P55055 PSMA6P1-201ENST00000400275 741 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 TAF9BP2-201ENST00000400856 499 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AL034374.1-201ENST00000406329 351 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.8□□□□□ -1.48
NR1H2P55055 RN7SKP86-201ENST00000410454 332 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 HSPE1P16-201ENST00000426640 348 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AL389925.1-201ENST00000432257 728 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AL731534.1-201ENST00000434711 269 ntBASIC5.8□□□□□ -1.48
NR1H2P55055 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.8□□□□□ -1.48
NR1H2P55055 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms